KEGG   Streptococcus anginosus C1051: SAIN_0885
Entry
SAIN_0885         CDS       T02828                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sang  Streptococcus anginosus C1051
Pathway
sang03030  DNA replication
sang03410  Base excision repair
sang03420  Nucleotide excision repair
sang03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAIN_0885 (ligA)
   03410 Base excision repair
    SAIN_0885 (ligA)
   03420 Nucleotide excision repair
    SAIN_0885 (ligA)
   03430 Mismatch repair
    SAIN_0885 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sang03032]
    SAIN_0885 (ligA)
   03400 DNA repair and recombination proteins [BR:sang03400]
    SAIN_0885 (ligA)
Enzymes [BR:sang01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SAIN_0885 (ligA)
DNA replication proteins [BR:sang03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SAIN_0885 (ligA)
DNA repair and recombination proteins [BR:sang03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SAIN_0885 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SAIN_0885 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     SAIN_0885 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SAIN_0885 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Ribosomal_L33 RTT107_BRCT_5
Other DBs
NCBI-ProteinID: AGU81629
Position
921543..923501
AA seq 652 aa
MKDRMLELVKLLNQYAHEYYTTDNPSVSDSEYDKLYHELLDLEKQYPEFVQPDSPTHRVG
GKVLEGFEKYQHQYPLYSLQDAFSREELDVFDARIRKDFPDVSYLCELKIDGLSVSLMYE
KGILVAGATRGDGSVGENITENLKRVKDIPLKLPSEVDMTVRGECYMPRSSFDAVNQLRQ
ENGEPEFANPRNAAAGTLRQLDTAIVAKRNLATFLYQEASPTSATSQEAVLNQLSKNGFS
VNERHILAHSMDEVWQFIGQIAQERDQLPYDIDGVVIKVNDLAVQEELGFTVKAPKWAIA
YKFPAEEKEAHLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRKG
DTVIVYKAGDIIPAVLQVVESKRQSEEKLEIPKNCPSCNSELIHFEDEVALRCINPRCPA
QIKEGLIHFASRDAMNITGLGPAVVEKLFDQQLVNDVAGIYRLTVEDLLQLENFKEKSAN
KLYTAIQTSKENSAEKLLFGLGIRHVGSKASQILLEHFHDLEQLAKAKREEIAALDSLGM
VIAESLSSYFAQEGTHILLSELKEAGLNFTYLGEKVAADAALSGLTVVLTGKLERLNRSE
AKKKLESLGAKVTSSVSKKTSLVVAGADAGSKLTKAQELGIDIRDEIWLESL
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgaaagacagaatgttagaactggtgaagttgctcaatcagtatgctcatgaatattat
acgactgataatccaagcgtatcggacagtgaatatgataagctgtatcatgaattatta
gatttagaaaagcagtatccagagttcgttcagcctgatagcccaactcatcgtgtggga
ggtaaggttttagaaggttttgaaaaataccaacaccagtatccgctctatagtttgcag
gatgctttttcacgtgaagagttagatgtatttgatgcacggattcggaaagattttcca
gatgttagctatctatgtgaactaaaaattgacggcctctctgtttctctcatgtatgaa
aaggggattttagttgcaggagcgactcgcggagacggttctgtcggggaaaatatcaca
gaaaatctgaaaagagtgaaagatattcctttaaagttgccaagcgaagttgatatgact
gttcgtggtgaatgttatatgccacgtagctcttttgatgcggtaaatcagctacgtcag
gaaaacggagaaccagaatttgctaatccgagaaatgcagcggcaggaacattgcgtcag
ttggatacggcgattgttgccaagcgaaatcttgcaacctttctctatcaagaagccagt
ccgacaagtgcgacgagccaagaagctgttttaaatcagttatctaaaaatggattcagt
gtgaatgagcggcatattttggcacattcgatggatgaagtgtggcagtttattggacaa
atcgctcaagaacgcgaccagttaccgtatgatattgacggtgttgtaatcaaggtaaat
gatttggcggtacaagaagagcttggttttaccgtaaaagcacctaaatgggcgattgct
tacaaatttccagccgaggaaaaagaagcgcaccttttatcagttgactggacggttggg
cggactggagttgttacgccgaccgccaacttgacgcctgtgcaattagcggggacaacg
gtcagccgagccactttgcacaatgtggattacattgctgaaaaggacattcgcaaaggc
gatacggtcatcgtttacaaagcaggcgacatcattccagctgttttgcaagtggttgaa
agtaagcgccaatcagaagagaaattggagattccaaagaattgtccaagttgcaacagc
gagttgattcactttgaagatgaggttgctttacgctgtatcaatccacgttgtcctgca
caaatcaaagaaggcttgattcattttgctagtcgcgatgccatgaatatcacaggtctt
ggtcctgctgttgtagaaaagttatttgaccagcagttggtaaatgatgtggctggcatt
taccgcttgactgtcgaagatttgctgcaattggaaaattttaaggaaaaatcagctaat
aagttgtatactgctattcagacttctaaggaaaactctgccgagaaattattatttggc
ttgggcattcgccatgttggaagtaaagccagtcagattttgctagagcattttcatgat
ttggagcaattagcaaaagcaaaaagagaagaaattgctgcgctggatagtctaggaatg
gtgattgctgagagtctttccagctatttcgcacaagaaggaactcatattttattgtcg
gaattaaaagaagcggggttaaatttcacctaccttggcgaaaaagtggcagcagatgca
gcgctttctggattgaccgttgttttaacaggaaaattggaacgtctcaatcgttcagag
gcgaaaaagaaattagaaagtttaggtgcaaaggtgacgagctcggtctctaagaaaaca
agtctagtcgttgccggagcagatgcaggaagtaaattaacaaaagctcaagagttagga
attgacattcgtgatgaaatttggcttgagagtttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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