KEGG   Sinocyclocheilus anshuiensis: 107663081
Entry
107663081         CDS       T04917                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107663081
  09122 Translation
   03013 Nucleocytoplasmic transport
    107663081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107663081
   03041 Spliceosome [BR:sanh03041]
    107663081
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107663081
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107663081
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107663081
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 107663081
NCBI-ProteinID: XP_016308719
Position
Unknown
AA seq 1552 aa
MAALILPSDWIKNWDKSGKNEFLQFFQDLVGKPCSHEFKDLQTALYELCWHVIQGNLKVD
VAASLLADVMELRDDMPSILADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGMLK
ERLDPETLESLGLIKQAQQFNQKIVKIKTKLFICIGHKKWYQAILNDNTHSASSTAVEQQ
GCFNLDPNRVLDIILEVYECRSDQDEFFIPLIKSYMCEHQTLCHMLGFKFKFHQEPNGET
PSSLYHIAAALLQHNLIALEDLYVHLLPLDSSIVEEHKRAILEAKQIARKLTMVLVPSEK
TEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIMDQMPAFYATSHKDIAIA
LCQLLHLIVEPLYRRAAVPKGAKGRLMMPLWNKQAPRPAESFDDLSRDVFTMLCYLGPHL
SHDPILFAKIVRLGKSFMKEYQSESRQDTKDKMDSLLSCFLSIADQVLLPSLSLMECNAC
MSEELWGFFKLFPYQHRYRLYGQWKNETYGNHPLLVKIKAQTVDRAKYIMKRLTKENVKP
SGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANP
EKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTNQLKAGKSFDLLILKEVV
QKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHELALPLC
LLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSVDVL
CNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKVHKYIAACEQIMAPVHEA
VVSLHLPRVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKLKMQIKAIDENTEMPLNK
KKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAKSTKNETITKFLQLCIF
PRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYTVASCTENESRRYGRFL
CCMLETVTRWHSDRAIYEKECGNYPGFLTIFRASGFDGGNKADQLDYENFRHVVHKWHYK
LTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALECRVHKICQEEKEKRPDLY
ALAMGYSGQLKGRKVHMVPENEFHQKEQPVRSATPGTLQNGPGNTGKPAAAASAGKAEEG
AVEDSDKSKDKSQAAQKTASKNSTAASKVSSSNGSSTPNSTKGSKEKDDKEKTTKEKKEK
KEKNPGSTPEAKAGGKDKQKEEKPTDSKEKTPKADKDKRKDDKKEEKSKIDGKSAEKEWS
KERDVSNDSKTKEGSKVEKNAGAGSMKSLVPRSEGAESERAEQKRRKLDTHSSPSHCSAV
KDNLNDFKDSASKHHPNHSTVLPKSKEKDDEKKESDKSRDRSKEREKKEDRKDRKRVSGS
VPDAVKGFGHLDYSNSDREMSQEAKRRKDENGMSSSKHSKSASPSESPHSNDKDNSKRSK
STSKDKSDLAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEKKHHKSSEKHR
NT seq 4659 nt   +upstreamnt  +downstreamnt
atggcggcgctgatcctcccgtctgactggatcaaaaactgggacaaatccggcaaaaat
gagtttttacagtttttccaggaccttgtggggaaaccctgcagtcatgagtttaaggat
ctgcagacagccctgtatgaactctgctggcatgttatccagggcaatctgaaggtggat
gtggctgccagtctcctggctgatgtaatggagctgcgggacgatatgccttctatttta
gctgatgttttctgtatattagatattgagactggctgtttggaggagaaacacaagcga
gatcattttacccagctggttggagcctgtttgatctgtgttcctgatggtatgctgaag
gagagattagatcctgaaacgctggagtctctgggactgatcaaacaggctcagcagttc
aaccagaagattgtcaaaatcaagaccaaactatttatctgtatcggacataaaaagtgg
tatcaagccatccttaatgacaatacacacagtgccagcagcacagcagtggagcagcag
ggatgtttcaatctggacccaaaccgtgtgctggacatcatcttagaggtgtatgagtgt
cgctctgatcaggatgagttcttcatccctcttatcaagtcctacatgtgcgagcaccag
accctctgccacatgctgggcttcaagttcaagttccaccaggagcctaatggagaaacg
ccatcatctctgtaccacatcgctgcagctcttcttcaacacaatctcatcgctcttgaa
gacctctatgttcatctcctgccgctggattccagcatcgtggaagagcacaagagagcg
atcctggaggccaagcagatcgcccgcaaactcaccatggtgctcgtcccctctgaaaag
acggaggacaaggagaaagaaaaggagaaggaagaggaaaagaatgagaagcctcctgat
aaccagaagctggggctgctggaggcgctgctgaggatcggtgactggcagcatgctcag
agcatcatggatcagatgccagctttctacgccacctcccacaaggacatcgccatcgca
ctgtgccagctgctgcacctgatcgtggagccgctttaccgcagggctgcagtccccaaa
ggtgccaaaggcagattgatgatgcctctgtggaacaaacaggcaccgcggccggccgaa
agctttgacgatctctccagggacgtcttcaccatgctgtgctacttgggccctcacctg
tcccacgaccccatcctgtttgccaagatcgtgcgactgggcaagagtttcatgaaagag
taccaaagtgaaagcaggcaagacacaaaggacaaaatggactctctgctgagttgtttt
ctcagtattgctgatcaggtgctgttgccgtctctctctctcatggagtgcaacgcctgc
atgtctgaagagctctggggcttctttaaactcttcccctaccagcacaggtatcgtctc
tatgggcagtggaagaatgagacgtatggcaatcatccactcctggtgaagatcaaggct
cagacggtagaccgagccaaatacatcatgaagcgactgactaaggagaacgtgaagccc
tcaggaaggcagatcggaaagttaagccacagtaaccccaccattctctttgattatatt
ctgtctcagatccagtggtacgataacctcataactccagtggtggactctctcaaatac
ctcacctctctcaactatgatgtgctggcctattgcattattgaagctttagccaaccca
gagaaagagaagatgaaacacgatgacaccaccatttcatcatggctgcagagtctcgct
agtctttgcggagcggttttcaggaaatatcccatcgagttagctggtcttctgcagtat
gtgaccaaccagctgaaagcaggcaagagttttgacctgctgatcctgaaggaggtggtg
cagaagatggccggaattgagatcacggatgaaatgactgtggagcagctggaggccatg
acaggcggagaacagctcaaagcggagggtggctactttggacagatcaggaacactaag
aagtcgtctcagcgtctgaaggatgctcttctggaccacgagctggctttaccgctgtgt
ctcctgatggcccagcagaggaacggtgtggtcttctctgagggcggggagaagcatctc
aaactcgtggggaagctttatgatcagtgtcacgacactcttgtacagtttggtggcttc
ttggcgtctaacctcagcacagaagactacatcaaaagggtgccgtcagtcgatgtcctc
tgcaaccagttccacacgccacacgatgctgctttcttcctgtctcggcccatgtatgcc
catcagattctgtccaagtatgacgaattgaagaaggcagagaagggcaacaggcagcag
cagaaggtccataagtacatcgcagcctgcgagcagatcatggctcctgtgcacgaggct
gtcgtgtctcttcacttgcccagagtgtgggatgaccttcgacctcagttctacgccacc
ttctggtccctcaccatgtacgacctggcggtaccacacaacgcctacgaccgcgaggtc
aacaaactgaagatgcagatcaaggctatcgatgaaaacacggagatgcctctgaacaaa
aagaagaaagagaaggaacgctgcacagcgctgcaggacaagctgcaggaagaggagaag
aaacagctggagcatgtgcagagagtcctgcaccgtctcaaactggagaaagacaactgg
ttactcgccaaatccactaagaatgaaaccatcactaagttcctgcagctctgcatcttc
ccccgctgcgtcttctcagccattgatgccgtttactgcgctcgcttcgtggagctggtg
caccagcagaagacgcccaacttctgcaccctgctctgctacgaccgagtgttctctgat
atcatctacacggtagcgagctgcacagagaacgagtcgcgccgctacggccgctttctg
tgctgcatgctggagactgtgactcgatggcacagcgacagagccatctatgagaaggaa
tgtggcaattatcctgggttcctgactattttccgagccagcggtttcgacggagggaac
aaagcagatcagctggactatgagaatttccggcatgttgttcacaaatggcattacaag
ttgactaaagcgtcagttcactgtctggagacgggcgagtacacccacatccgcaacatc
ctgatcgtgctcaccaagatcctaccctggtaccccaaggtgctgaacctgggccaggct
ctggagtgccgcgttcacaagatctgccaggaagagaaagagaagaggcccgatctctat
gcgttagccatgggctactctggccaattgaaaggcaggaaagtgcacatggtgccagaa
aatgagttccaccaaaaggagcagccagtgcgcagcgccacgcctggcactctgcagaac
ggaccgggtaacacgggcaagcctgccgccgctgccagcgctggcaaagccgaggagggc
gccgtcgaggactcagataaatccaaggacaaatctcaggcggctcagaaaactgccagc
aaaaacagcaccgcagccagtaaagtgagcagcagcaacggaagcagcacgccgaacagc
actaaagggagcaaagagaaggacgataaagagaagaccacaaaggagaaaaaggagaag
aaagaaaagaacccaggaagcactccagaggccaaggcaggagggaaggacaaacagaag
gaggagaagcccactgacagcaaggagaagacgcccaaggccgacaaggacaagaggaag
gatgacaagaaggaagagaagagcaagattgatgggaaatccgccgaaaaagagtggtcc
aaggaacgcgacgtgtccaacgacagcaagactaaggaaggcagcaaagtggagaagaat
gctggggccggaagcatgaagtccctcgtgcccagatccgaaggagccgagtctgaacgg
gcagagcaaaaaagacgaaagcttgacacgcactcgtcaccgtcgcactgctctgcagtt
aaggacaatctcaacgacttcaaggactcagcttcaaagcaccatcctaaccacagcaca
gtcctgcccaagagcaaagagaaggacgacgagaagaaagagtctgacaaatccagggac
cgttccaaagagagggagaagaaagaagaccggaaggaccggaaacgagttagtggctcc
gtccctgacgctgttaaaggatttgggcacttggactactcaaacagcgaccgcgagatg
agccaggaagccaagcgccgcaaagatgaaaatggaatgagctcctccaaacacagcaag
agcgccagcccctccgaatcgccccactccaatgacaaggacaacagcaaacgctccaag
tccaccagcaaggacaagagcgatctggccaaaccggagaagacctctggaggcaaaaag
gagtccaggcacgacaaagagaaatccgaaaagaagagagacagcactggcgctaaagaa
gagaagaaacatcataaatcatcagaaaagcacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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