KEGG   Sinocyclocheilus anshuiensis: 107671701
Entry
107671701         CDS       T04917                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107671701
  09122 Translation
   03013 Nucleocytoplasmic transport
    107671701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107671701
   03041 Spliceosome [BR:sanh03041]
    107671701
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107671701
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107671701
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107671701
SSDB
Motif
Pfam: efThoc1 Death HsdM_N
Other DBs
NCBI-GeneID: 107671701
NCBI-ProteinID: XP_016320116
UniProt: A0A671LK00
Position
Unknown
AA seq 655 aa
MSPPSYFDFSEARDKFTAAAKSAVDIRNCKPLTNAFSHLPGNETEKKATLDQALRGVLEE
QIVKQKANVEDFLSLIYISIDVVTEGVCSATTPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNAFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQDSTLGLQHTEVKEEGMDVEEGEMGDEDAPAPCTIPIDYNLYRKFWT
LQDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSYKLDDMQASKRKLEEMRTAAGDHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCALNDDQSLWIEDTTKL
VYQLLKETPPDGDKFASMVEHILNTEENWNSWKNEGCPSFVKERPAETKPVRPSRKRQAP
EDFLGKGPDRKILMGNEELTRLWNLNPDNMEACKSDSREFMPSLEEFFVEAIEQADPTNM
VEDEYKVVHNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPS
EEIKTGEEDDDENGDNLLKDSNDSPSIQSKAVTNSQMDEIAAKLGSKWKTVADHLEMSEK
EIRVIESDSEDVELQAKMLLVAWQDREGPQATMESLVTALNSAGFSNITEGLSET
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgtctccgccgtcttacttcgacttcagtgaagccagagataaatttacggctgccgct
aaaagtgctgtagatatcaggaactgcaaacccctgaccaacgctttcagccacctgcct
ggaaatgaaactgagaagaaagccactcttgatcaagccctgcgtggcgttcttgaagag
cagatcgtgaagcagaaagcaaacgttgaagatttcctttctctgatctacatcagtata
gacgtcgtgactgaaggcgtctgctctgccaccacgccttttcttctgctgggagatgtt
ctcgactgtctccctctggaccagtgcgacaaaatcttctcctttgttgaagagaatgtc
tctacatggaaatctaatgcattttactctgctggaaaaaattacttgttaagaatgtgc
aatgacctcctcaggagactctcgaagtctcagaatacagtgttttgtggacgaatccag
ctgtttttagcacgtctctttcctttgtcagaaaaatcaggcctgaacttacagagtcaa
ttcaaccttgataacatcacagtgttcaataaaaatgagcaggatagcacacttggactg
cagcacacagaggttaaagaggaagggatggacgtggaggagggagagatgggcgatgaa
gatgcacctgctccctgcaccattcctattgactacaacttgtacagaaaattctggacc
ctgcaggactatttcagaaaccctgtacagtgctacgacaagttctcatggatgactttc
cttaagtattcagatgagacactagctgtcttcaagagctacaaactggatgacatgcag
gcctcaaagagaaagctggaggagatgaggactgctgctggagaccacgtctactttgcc
aagttcctcaccagtgagaaattgatggaccttcagctgagtgacagcaacttcagacga
cacattctgcttcagtatctcatcctcttccagtatctcaagggccaggtcaagttcaag
agttccagctgtgctttgaatgacgatcagtctttgtggattgaggacacaaccaaacta
gtctatcagttactgaaagaaacccctccagatggtgacaagtttgcgtctatggttgag
cacatcctgaacacagaggaaaactggaactcttggaaaaatgaaggctgtccaagcttt
gtgaaagaaaggccagcagagaccaaacccgtccgtcccagcagaaagagacaagcacca
gaggactttttggggaagggcccagatcgcaaaatcctcatgggaaatgaggaactcacg
aggctctggaatctaaaccctgataacatggaggcctgcaagtcagatagcagggagttc
atgccatcactggaggaattttttgtagaagctatcgagcaggcagatccgactaacatg
gtggaggatgagtacaaagttgtgcataactcaaactacggctggcgagccttgcgattg
ctctccagaaggagtcctcacttcttccagcccaccaaccagcagttcaagagtctggca
gactatctggaaaacatggtcatcaaactggccaaagagcttcctaaggaccttccttct
gaggagataaaaacaggagaggaggatgatgatgagaatggagataacctgttaaaagac
agcaatgacagtcccagcattcagagcaaggcggtgaccaacagtcagatggatgagatc
gcggccaagcttggatccaagtggaagacggtggcagaccatctggagatgagtgagaag
gagatccgcgtgatcgagtctgacagtgaggatgtagaactgcaggccaagatgctgctg
gtggcctggcaggaccgagaaggccctcaagctacgatggagagcctggtcacagctctg
aactcggctggtttcagtaacatcacggaaggtctcagcgaaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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