KEGG   Sinocyclocheilus anshuiensis: 107680590
Entry
107680590         CDS       T04917                                 
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107680590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107680590
Enzymes [BR:sanh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     107680590
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     107680590
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 ATP_bind_1 CbiA AAA_16 AAA_22 TniB SRP54 PduV-EutP nSTAND3 AAA_18 MMR_HSR1
Other DBs
NCBI-GeneID: 107680590
NCBI-ProteinID: XP_016332015
UniProt: A0A671RNA3
Position
Unknown
AA seq 445 aa
MTAEASEKSAEEGMSSSGSAGTSGTRFDLEKETELRFEVEAGERVQLELLSGLAEVFGSE
LNRNKKYTFGPGSKIAVFTWQGCSVSLSGKTEVAYISKDTPMLLYLNTHAALEQMRRQAG
KDNERGPRVMVVGPTDVGKTTVCRVLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCI
ERPADVEEGFSVQAPLVFHFGSTTPGTNIKLYNKLTSSLAEVFSQRCEVNRRASVGGCII
NTCGWVKGSGYQALVHCASAFQVDVVIVLDQERLYNELKRDLPHFVRVVLLPKSGGVVER
SKDCRRESRDEKIREYFYGFRGTSFYPHAFDVRFSDVRIYKIGAPSIPDSCLPLGMSQDD
TQLKLVPVSPGRDLTHHVLSVSSVDDDAEVGAGQSRGILESPVCGFIVVTAVDTQAQVMT
VLSPAPRPLPRHTLLIMDIRFIDLK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgactgcagaagcctcagaaaagtcagcggaggagggcatgagttcgtcgggcagcgct
ggcacttcaggtacgcgatttgacctggagaaagagacagaactgcgctttgaggtcgaa
gcaggagaacgagtccagctcgagctgttgtccggtctggcagaggtgttcggatccgaa
ctgaaccgaaataagaagtacacttttggaccaggctctaagattgctgtgttcacctgg
caaggctgcagtgtgtcgctgtcaggcaagacggaggtggcttatatctccaaagataca
cccatgctgctgtatctcaacacccatgcagctctggagcagatgagacgtcaggcaggg
aaagacaacgagagaggccctcgggtaatggttgtcggaccaactgatgtgggaaagact
acagtttgtcgagtgttgctgaactatgctgtgcgactgggacgaaggcctacgctggta
gaactggatgtcggccagagcagcgtctctgtgcctggaactatgtcagctctgtgcatc
gagcgtcctgctgatgtagaagaaggtttctctgtgcaggctccgctagtctttcacttt
ggctctaccacaccaggaacaaacatcaaactttacaacaagctgacttccagccttgca
gaagtgttttctcagcgctgtgaggtgaaccgcagggctagtgtgggtggctgtataatc
aacacctgtggctgggtcaaaggttcaggctaccaggctctggtccactgcgcttcagct
ttccaggtggatgttgttatagtcctggaccaggagcgtctctataatgagcttaaacgt
gacctgccacactttgtacgtgtcgtccttctgccaaagtccggcggtgtggtggagcgc
tccaaggactgccgacgagagtcacgggacgaaaagatccgggaatacttctacggcttc
cgtggaacttccttttaccctcatgcttttgatgtgcgcttttcagatgtgcgtatttac
aagatcggtgcaccctcaattccagactcctgtctccctctgggtatgtcccaggacgac
acccagctcaaactcgtgccagtcagccctggcagggatttaacccaccatgtgctgagt
gtgagttcggtggatgatgatgccgaggtgggtgcaggacagagcagagggattttagag
agtcccgtgtgtggtttcatagttgtgaccgcagtggacacacaagctcaggtgatgaca
gttctttcaccagcgcccagacccctgccgcgacacactctgctcatcatggacattcgt
ttcatcgaccttaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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