KEGG   Sinocyclocheilus anshuiensis: 107686403
Entry
107686403         CDS       T04917                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107686403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sanh03041]
    107686403
Spliceosome [BR:sanh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107686403
 Complex C
   U5 SnRNP specific factors
    107686403
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 T2SSE PhoH SWI2_SNF2 Sigma54_activ_2
Other DBs
NCBI-GeneID: 107686403
NCBI-ProteinID: XP_016338859
UniProt: A0A671SZW4
Position
Unknown
AA seq 2134 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTKMGDRSQRTK
PQMLEERRAKRRKRDEDRHDINKMKGFTLLSEGIDEMVGIVYKPKTKETRETYEILLSFI
QAALGDQPRDILCGAADEVLAVLKNDKMRDKERRREVEQLLGPTDDTRYHVLVNLGKKIS
DYGGDKELQNMDDNIDETYGVNVQFESDEEEGDEDQYGEVRDEGSDDSEGVEADESSTLT
ANLGNTGDVMMTKKKDLHPRDIDAFWLQRQLSRFYNDAIVSQKKADEVLEILKTASDDRE
CENQLVLLLGFNTFDFIKVLRQHRRMILYCTMLASAQSEAEKEKIMNKMEADQDLSKVLY
QLQETEKEDIIREERSRRERVRKSRVDDLESMDIDHGEAMTSRQLLDLEDLAFTQGSHFM
ANKRCQLPDGSFRKQRKGYEEVHVPALKPKVFGDDETLMAIEKLPKYAQAGFEGFKTLNR
IQSKLFKTTMETDENLLVCAPTGAGKTNVALMAMLREIGKHINMDGTINVDDFKIIYIAP
MRSLVQEMVGSFGKRLASYGITVSELTGDHQLCKEEINATQIIVCTPEKWDIITRKGGDR
TYTQLVRLIIIDEIHLLHDDRGPVLESLIARTIRNVELTQEDVRLIGLSATLPNYEDVAT
CLRVDPSKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV
FVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYSFA
IHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTE
LGALDILQMLGRAGRPQYDSKGEGILITSHGELQYYLSLLNQQLPIESQMVAKLPDMLNA
EIVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYAVSHDDRSIDPLLERRRMDLVHTAATV
LEKNNLVKYDKRSGNFQVTDLGRIASHFYITHESIMTYNQLLKPTLSEIELFRVFSLSSE
FRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAYISQLKLEGFALMADMVY
VTQSAGRLMRAIFEIVLSRGWAQLTDKTLNLCKMIDKRMWQSMSPLRQFRKLPEEVIKKI
EKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKLDLAVHLQPITRSTLKVELT
ITPDFQWDDKIHGSSEAFWILVEDVDSEVVLHHEYFLLKAKYAQDEHLVTFFVPVFEPLP
PQYFIRIASDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNTAFESLYQK
FPFFNPIQTQVFNAVYNSDDNVFVGAPTGSGKTICAEFAILRMLLHNSEGRCVYITPMEA
LAEQVFIDWHQKFQETLNKKVVLLTGETSTDLKLLGKGDIIVSTPDKWDILSRRWKQRKN
VQNVSLFLVDEIHLIGGDNGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWL
GCSTTATFNFHPNVRPVPLELHIQGFNVSHTQTRLLSMAKPVYHAIMKHSPSKPVLVFVP
SRRQTRLTAIDILTFCAADVVPQRFLHSTEKDLAPFMENLSDVTLKETLSNGVGYLHEGL
SPTERRIVEHLFNSGAIQVMVASRSLCWGTNISAHLVIVMDTQYYNGKIHAYVDYPIYDV
LQMVGKANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVTKT
VENKQDAVDYMTWTFLYRRMTQNPNYYNLQGMSHRHLSDHLSELVENTLQDLEQSKCISI
EDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYKNIPIRHHE
DTLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAVRLIQ
ACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCMDKGVESIFD
IMEMEDEDRTGLLQLTDVQMADVARFCNRYPNIELSYEVADKDNIKSGSPVVVQVQLERE
EEVTGPVIAPLFPQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLDFVAPVVGVHNY
TLYFMSDAYMGCDQEYKFSMEVNEADSEGESDSD
NT seq 6405 nt   +upstreamnt  +downstreamnt
atggccgatgttactgcacgtagtttgcagtatgaatataaagcgaactccaacttggtg
ttgcaagcggacagatctctgatcgaccgcacccgcagagatgagcccaccggagaggtg
ctgtctctggtcggcaaactggaggggacaaagatgggagacaggagtcagagaaccaaa
ccgcagatgctggaggagaggagagcaaagagaagaaagagagacgaagacagacacgac
ataaacaagatgaagggcttcacactgctgtctgaggggattgatgagatggtgggcatt
gtgtacaagcccaagaccaaagagacaagagaaacttatgaaatcctcctcagcttcatt
caggcagcccttggagatcagccgagggatatcctgtgtggagcagcagacgaggtgttg
gctgtgctgaagaatgacaagatgagagacaaagaaaggaggagggaggtggagcagttg
ctggggcctactgacgacacacgctaccacgtcctggtcaacctgggcaagaagatctct
gactatggtggagacaaagagctccagaatatggatgacaacattgatgaaacctatgga
gtcaatgtgcagtttgagtctgatgaggaggagggcgatgaggaccagtacggagaggtt
cgggatgaaggctctgatgacagcgagggagtggaggcagatgagagcagcaccctgact
gctaacctgggaaacacaggcgacgtaatgatgaccaaaaagaaggatcttcacccccga
gacattgatgccttctggcttcagcgacagctcagccgcttctacaatgatgccatcgtg
tctcagaagaaagcagatgaggtcttggagatccttaagactgccagtgatgacagagag
tgtgagaaccagctggtgctgcttttgggcttcaacacattcgacttcatcaaggtcctc
cgccagcacagacgaatgatcctgtactgcaccatgttagccagtgctcaaagtgaggct
gagaaggaaaagatcatgaataaaatggaagctgatcaggatctttccaaagttctttac
cagctgcaggagactgaaaaagaggacatcatcagggaggagcgatctcgccgggagaga
gttagaaagtctcgtgtggatgatctggagtctatggacattgatcatggagaggctatg
acctcgaggcaactactagatctggaagatctggccttcactcagggcagtcacttcatg
gccaacaagcgctgccagctgcctgatggctccttccgcaaacagaggaagggttacgag
gaagtccatgtgcccgctctcaaacccaaagtctttggtgatgatgagacgttgatggct
attgagaagctgcccaaatatgcccaagctggattcgaaggattcaaaaccttgaatcgc
atacagagtaaactcttcaaaaccacaatggagacggatgagaacctgctggtttgcgct
ccaacgggtgctggcaaaactaatgttgctctcatggcaatgctcagagagatcggaaag
catattaacatggatggcaccatcaatgttgatgattttaaaatcatctacatcgctccc
atgcgctcactggtacaggagatggtgggcagctttggcaagcgcttggctagttatggc
atcactgtttctgagctgaccggagaccatcagctgtgtaaggaggaaataaatgccacc
cagattattgtgtgcaccccagagaaatgggacatcatcacccggaaaggaggagatcgc
acatatacgcagcttgtgcgccttatcattatcgatgagatccacttgctgcatgatgac
cgtggccccgttctggaatccctgattgctcgaaccatccgcaatgtggaactgacacag
gaagatgtgaggctcattggcctcagtgccacactgcccaactatgaggatgtggcgacc
tgccttcgtgtggatccatccaaggggctcttctatttcgacaacagtttccggcctgtt
cctctggaacaaacctatgtaggaattacagaaaagaaggctatcaagcgtttccagatt
atgaatgagatcgtctatgagaagatcatggaacatgctggaaagaatcaggtgttggtg
tttgtgcactcgagaaaggagaccggaaagacggcacgtgcgatcagggacatgtgtttg
gagaaggacacactggggttgttcctaagagagggttcggcctccactgaggtcctgagg
actgaagcagagcagtgcaagaacctggagctgaaagatcttttgccgtatagttttgct
attcaccatgctggaatgaccagagtggacagaacgttggtagaggatctgtttgctgac
cgtcacattcaggtattggtgtctacagccactctggcctggggtgtgaacttgccagcg
cacactgtcatcatcaaaggcacacaggtgtacagcccagagaaaggcagatggacagag
ctgggagccctggatatcctacagatgctgggtcgtgctggcaggccgcagtatgactct
aagggagagggtattttgatcacttcacatggagagctgcagtattacctgtccctgctc
aatcagcagctgcccatcgagagccagatggtggccaaactacccgacatgctcaatgca
gagatagtgttgggcaatgtgcagaatgccaaggatgctgtaaattggctgggttacaca
tacctttatgttcggatgttgcggaaccccactctatatgccgtctcccatgacgaccgc
agcattgaccccctgctggagcgacgcaggatggacctggtgcacacggcagccactgtc
ttggagaagaacaacttggtcaaatatgacaagagatctggcaactttcaggtgacagac
ctgggccgcattgccagtcatttctacatcacccacgagtccataatgacttacaaccag
ctgctgaagcctacactgagtgagattgagctcttcagggtgttctcgctctcctctgag
ttcagaaacatcaccgtcagagaggaagaaaaacttgagcttcagaaactgcttgagaga
gtccctattccagtgaaggaaagcattgaagagcccagtgcaaagattaatgtgctgctg
caggcatatatatctcagctcaaactggagggctttgctctcatggctgacatggtctat
gttacacagagtgctggcaggctgatgagggccatttttgagattgtcctgagcagaggc
tgggcccaacttaccgataagactttgaacctttgcaagatgatcgacaaaaggatgtgg
cagtcgatgtctcccttgcgtcagttccgtaagcttccagaggaggtcatcaaaaagatt
gagaagaagaacttcccctttgagcgcctctatgatctgaaccacaacgaaattggtgag
ttgatccgcatgccaaagatggggaagaccattcataagtatgtccatcagttcccaaag
ctggacctggcagttcatctgcagcccatcacacgctccactctgaaagtggagctcacc
atcacaccagatttccagtgggacgacaagatacacggctcatctgaggccttctggatc
ttagtggaggatgtggacagtgaggtcgttcttcatcatgagtacttcctcctgaaggcc
aagtatgctcaggatgagcatcttgtcactttctttgtgcccgtgtttgagccgctgcca
ccacagtacttcattcgcatagcttcagaccgttggctgtcatgtgagacacagctgcct
gtttctttccgtcacctgatcctgcctgagaaatatcctccccccaccgagctgctggac
ctgcagccattgcccgtgtctgctctaagaaacacagccttcgagagcctctaccagaag
tttcccttttttaacccaatccagacccaagtgttcaatgccgtgtacaacagcgatgat
aacgtatttgttggcgcccccactggcagcgggaagaccatatgtgctgagtttgccatt
cttaggatgctcctacacaactcagagggccgctgtgtctacatcacacccatggaggct
ctggccgaacaggtctttattgactggcaccagaagttccaggagactttgaataagaag
gttgtcctgctcaccggtgagacgagcactgacctcaagctgctgggtaaaggcgacatc
atcgtcagcaccccagacaagtgggacatcctatcccgccgctggaaacagaggaagaat
gtgcagaacgttagtctcttccttgtagacgagattcatctcattggaggtgacaatgga
cctgtgctggaggtgatttgctccaggatgaggtacatctcctctcagattgagcggccc
atccgtatcgtggccctcagctcctctctgtccaatgctaaagatgtggcccactggctt
ggctgcagcactacggccaccttcaacttccaccccaatgtcaggccggttcctcttgaa
cttcacatccagggcttcaacgtgagtcacacacagactcgtctgctgtccatggctaaa
ccagtgtatcacgccataatgaaacattccccatccaagccagtgctggtgttcgtgcca
tcaagacgtcagactcgtctcaccgctattgatatcctcaccttctgtgctgcagacgtg
gtcccacaaaggttcctgcactcaaccgagaaggacctggctccattcatggagaatctc
tctgatgttacactgaaggagaccctctctaatggggtggggtaccttcatgagggcctt
tcacctacagagcgcaggattgtggagcatctcttcaattctggtgccattcaggtgatg
gtggcgtctcgttctctctgctggggcaccaacatttctgcccacctggtgattgttatg
gacacgcagtactacaacgggaaaatccatgcatatgtggactatccaatctatgatgtg
ctccagatggtaggaaaggctaaccgtcctctccaggatgatgagggccggtgtgttatc
atgtgtcaagggtccaagaaggacttcttcaagaagttcctctacgagcctctgcctgtg
gagtctcacctggaccactgtcttcacgaccatttcaatgctgagatcgttaccaagacg
gtggagaacaaacaggacgctgtagactacatgacctggacgtttctgtatcgccgcatg
acccagaaccccaactactacaacctgcagggtatgtctcatcgtcacctgtcagatcat
ctgtctgagctggtggaaaacaccttgcaagatctggagcagtccaagtgcatcagcatc
gaggatgagatggatgtggcacctctgaatctgggcatgatcgcagcctattactacata
aactacaccaccattgagctgttcagtatgtccctaaacgccaagacaaaggtccgtggc
ctcatcgagatcatctccaatgctgcggagtataaaaacattcccatcaggcaccatgaa
gacaccctgctgcggcagctggctcagaaggttcctcacaaactgaacaaccccaagttc
aatgaccctcatgtgaagaccaacctgctgctccaggctcatctgtcccgcatgcagctg
agcgctgagctccagtcagatactgaggagatcctcagcaaagctgtgcgactgatccag
gcgtgtgtagatgtgctctccagtaacggctggttgagtccggcgctggctgctatggag
ctggctcagatggtcacacaagccatgtggtccaaagactcgtacctcaaacaactaccc
cacttcacttctgaacacatcaagcgctgcatggacaagggtgtggagagcatcttcgac
atcatggagatggaagacgaggatcgcactggtcttctgcagcttacagatgtacaaatg
gcggacgtggcacgcttctgtaaccgctatcccaacattgagctgtcatacgaagtggct
gacaaagacaacatcaagagtggaagtccagtggtcgtccaagtgcagttggagcgagaa
gaggaagttacaggtcctgtcattgctcctctgttccctcagaaacgtgaagaaggctgg
tgggttgttattggagaccccaaatcgaacagtctcatctctatcaagaggctaactctt
caacagaaggccaaggtgaaacttgactttgtagcacctgttgttggtgtgcacaactac
acactgtacttcatgagcgatgcctacatgggctgcgaccaggaatacaagttcagcatg
gaggttaatgaagcagacagtgagggggaaagtgacagtgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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