KEGG   Salinispora arenicola: Sare_1178Help
Entry
Sare_1178         CDS       T00613                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
saq  Salinispora arenicola
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:saq00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sare_1178
Enzymes [BR:saq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sare_1178
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sare_1178
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1325679..1326542
Genome map
AA seq 287 aa AA seqDB search
MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG
KYLWLPLDSGDAVIGHLGMSGQLLLQPGAAPDEAHLRVRFRFADDGPELRFVDQRTFGGL
SVSAGGAEMPTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQTLLSGVGNIYAD
EALWRARLHGARPADGLTGPAALRLLGHVRDVLGEAIKEGGTSFDALYVNVNGESGYFDR
ALNVYGRADQPCRRCGTPVRREAFMNRSSYSCPRCQPRPRRALQASG
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgagctgcctgaggtcgagaccgttcggcaggggctggcccagtgggtcaccggc
cggcggatcgccgaggtcgaggtgcggcacccccgggcgatacgtcggcacccggccggt
gccgcccacttcgccgacgtgcttgtcgggacgaccgtccgggacgtacggcgacgcggc
aagtacctgtggcttccgttggacagtggcgacgcggtgatcgggcacctcggcatgtcg
gggcaactgctcctgcagccgggtgcggcaccggacgaagcccacctgcgggtgcggttc
cggttcgccgatgacgggcccgagttgcgcttcgtcgaccagcggaccttcggcgggctg
tcggtcagtgcggggggcgcggaaatgcccacggagatcgcgcacatcgcgcgggatccg
ctggaccccgagttctccgaggccgccttcgtcgcggcgctacgccgccgccgcaccgag
gtcaagcgggctctgctggatcagacgttgctctcgggcgtgggcaacatctatgccgac
gaggcgctgtggcgggcccggttgcacggcgcccggccggctgacgggctgaccggcccc
gccgcgttgcgtctgctcgggcacgtccgggacgtgctcggtgaggcgatcaaggagggc
ggaacaagcttcgacgccctgtatgtcaacgtcaacggtgaaagcggctacttcgaccgt
gccctgaacgtgtacgggcgggcggaccagccgtgccggcggtgcggtacgccggtgcgc
cgcgaggcgttcatgaaccggtcgtcgtacagctgcccgcgctgccagccgcggccccgc
agggcgctccaggccagcggctga

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