KEGG   Salinispora arenicola: Sare_5005Help
Entry
Sare_5005         CDS       T00613                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
saq  Salinispora arenicola
Pathway
Base excision repair
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:saq03410]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5673522..5674382
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALADYLRRRAVGRRVDRLEIAAISALKTYDPAITAAAGRQVTDARRLGKFLD
LVLDADLHLVIHLARAGWLQFREEFPSRGPLRPGKGPVALRVRLDDGSGFDLTEAGTQKS
LAIYLVTDPAVVPGVARLGPDALAVDPATFAERLRGRRGQVKGVLTDQTVLAGVGNAYSD
EILHTARLSPFALTSRLTDDQLAALHTATRDVLGEAVSRSVGQRAAELKGEKRSGLRVHA
RTGLPCPVCGDTVREVSFADSSLQYCPACQTGGKPLADRRLSRLIR
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactaccggaggtagaggcgctcgccgattatctgcgtcgacgcgccgtcggc
cggcgggtcgaccgcctggagatcgccgcgatcagcgccctgaagacgtacgacccggca
atcacggcggcggctggtcggcaggtcaccgacgcccggcggctcggcaagttcctcgac
ctggtgctcgacgccgacctgcacctggtgatccaccttgcccgcgcgggctggctacag
ttccgggaggagttcccgtcccgtggcccgctacgccccggcaagggtccggtggcactg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggccggtacgcagaagagt
ctcgccatctacctggtgaccgatccggcggtggtgcccggggtggcccggctcggcccg
gacgcgctcgccgtcgacccggccaccttcgccgagcgactccgcggccgcaggggccag
gtcaagggggtactcaccgatcagacggtgctcgccggggtgggcaacgcgtactccgac
gagatcctgcacacggcccggttgtcaccgttcgcgctgacctcccggctgaccgacgac
cagctggccgccctgcacacggcgacccgggacgtgctcggcgaggcggtgtcccggtcg
gtgggacaacgggctgcggagctcaaaggcgagaagcgctccgggctacgggtacacgcc
cgaaccgggctgccctgcccggtctgtggtgacaccgtacgggaggtctccttcgctgat
tcgagcctccagtactgtccggcgtgccagaccggcggaaagccgctcgcggaccgacgg
ttgtcccgacttatacggtga

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