KEGG   Salinispora arenicola: Sare_5005Help
Entry
Sare_5005         CDS       T00613                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
saq  Salinispora arenicola
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:saq00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sare_5005
Enzymes [BR:saq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sare_5005
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sare_5005
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5673522..5674382
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALADYLRRRAVGRRVDRLEIAAISALKTYDPAITAAAGRQVTDARRLGKFLD
LVLDADLHLVIHLARAGWLQFREEFPSRGPLRPGKGPVALRVRLDDGSGFDLTEAGTQKS
LAIYLVTDPAVVPGVARLGPDALAVDPATFAERLRGRRGQVKGVLTDQTVLAGVGNAYSD
EILHTARLSPFALTSRLTDDQLAALHTATRDVLGEAVSRSVGQRAAELKGEKRSGLRVHA
RTGLPCPVCGDTVREVSFADSSLQYCPACQTGGKPLADRRLSRLIR
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactaccggaggtagaggcgctcgccgattatctgcgtcgacgcgccgtcggc
cggcgggtcgaccgcctggagatcgccgcgatcagcgccctgaagacgtacgacccggca
atcacggcggcggctggtcggcaggtcaccgacgcccggcggctcggcaagttcctcgac
ctggtgctcgacgccgacctgcacctggtgatccaccttgcccgcgcgggctggctacag
ttccgggaggagttcccgtcccgtggcccgctacgccccggcaagggtccggtggcactg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggccggtacgcagaagagt
ctcgccatctacctggtgaccgatccggcggtggtgcccggggtggcccggctcggcccg
gacgcgctcgccgtcgacccggccaccttcgccgagcgactccgcggccgcaggggccag
gtcaagggggtactcaccgatcagacggtgctcgccggggtgggcaacgcgtactccgac
gagatcctgcacacggcccggttgtcaccgttcgcgctgacctcccggctgaccgacgac
cagctggccgccctgcacacggcgacccgggacgtgctcggcgaggcggtgtcccggtcg
gtgggacaacgggctgcggagctcaaaggcgagaagcgctccgggctacgggtacacgcc
cgaaccgggctgccctgcccggtctgtggtgacaccgtacgggaggtctccttcgctgat
tcgagcctccagtactgtccggcgtgccagaccggcggaaagccgctcgcggaccgacgg
ttgtcccgacttatacggtga

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