KEGG   Salmo salar (Atlantic salmon): 100195020
Entry
100195020         CDS       T04363                                 
Symbol
dkc1
Name
(RefSeq) dyskeratosis congenita 1, dyskerin
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100195020 (dkc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    100195020 (dkc1)
   03032 DNA replication proteins [BR:sasa03032]
    100195020 (dkc1)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    100195020 (dkc1)
 Prokaryotic type
    100195020 (dkc1)
DNA replication proteins [BR:sasa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     100195020 (dkc1)
SSDB
Motif
Pfam: DKCLD TruB_C_2 TruB_N PUA UPF0113 DUF908
Other DBs
NCBI-GeneID: 100195020
NCBI-ProteinID: NP_001133521
UniProt: B5X270
Position
ssa04:complement(38472643..38479074)
AA seq 522 aa
MADVEMNSAKKQKKKKEKTVADDEVGDIQESGDFLIKPESKVASLDTSQWPLLLKNFDKL
NIRTAHYTPLPNGSNPLKRNIQDYVRTGFINLDKPANPSSHEVVAWIRRILRVEKTGHSG
TLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIENEHTLARGIETLTGALFQ
RPPLIAAVKRQLRVRTVYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQ
MQELRRVRSGVLGERDNLVTMHDVLDAQWQYDHNKDETYLRRVIYPLEKLLVSHKRLVMK
DSAVNAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICIATALMTTAVISTCDHGV
VAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKRGKANDSTPSDWKDGYVDYSAS
KPKAEETGNGDAKRKREDSDSDAAAASAPSTPSADDPKKKKEKKKKGKKQKLEEPAAEEE
PAAEEEPAAEEEPAAETEGEVGESAKKKKKKKKKKEVDAEAE
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcggacgttgaaatgaactctgccaaaaaacagaagaagaagaaggaaaagacagtt
gctgatgatgaagttggggatattcaggagagtggtgatttcctcatcaaaccagagtcc
aaagttgccagtctggacacatctcagtggccattgctgttgaaaaattttgacaaactc
aacatcaggacagctcactacacacccttgccaaatggctcgaaccctttgaagaggaac
attcaggattatgtccggacaggcttcatcaacttggacaagcctgcaaatccctcctct
catgaggtggtggcctggatccgacgtatcctgcgagtggagaagactggccacagtggc
accctggaccccaaggtgacaggctgcctcattgtgtgtgtggaccgagccacacgactg
gtcaagtcccagcagagtgcaggcaaagagtatgtgggaattgttcggctgcacaatgct
attgagaatgagcacacacttgctaggggaattgaaaccctcacaggtgctttgttccag
cgaccacctctcatcgcagccgttaagcgccagttgagagttaggaccgtttatgaaagc
aaactcatcgagtacgacccagagaggagattgggtattttctgggtgagctgcgaggct
gggacctacatcaggactctgtgtgtccacctggggctcctcctgggtgttggtggtcag
atgcaggagctgaggagagttcgctctggtgttctgggagagagggacaacctggtgacc
atgcacgatgtgctggatgctcagtggcagtatgaccacaacaaggacgagacgtacctg
cgcagagtcatctacccgctagagaagcttctggtgtcgcacaaacgtttggtcatgaaa
gacagtgcagtcaatgcgatctgctatggagcgaagataatgttgcctggtgtcctacga
tatgaggatggcatcgagatgaaccaagatattgtggtgataacgaccaaaggagaggcc
atttgtatagctactgccctcatgactactgcagtgatctccacgtgtgaccacggtgtc
gtggccaagatcaagagggtcatcatggaacgcgacacctacccccgcaagtggggcttg
gggcccaaggccagccagaagaagatgatgatccagaagggtctgctggacaaacgcggc
aaagccaacgacagcactccatcagactggaaggatggctacgtagattacagtgcgtcc
aagcccaaggctgaagaaaccggcaatggggacgcaaagaggaagagggaagacagcgat
agtgatgctgcggcagcctctgcaccttccactccatcggcagacgaccccaagaagaag
aaggagaagaaaaagaaagggaaaaagcaaaaactagaggagccagcagcagaggaggag
ccagcagcagaggaggagccagcagcagaggaggagccagcagcagagacagaaggagag
gtgggcgagagtgccaagaagaaaaagaagaagaagaagaagaaggaagtggatgcagaa
gcggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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