KEGG   Salmo salar (Atlantic salmon): 106562692
Entry
106562692         CDS       T04363                                 
Name
(RefSeq) TNF receptor-associated factor 6-like
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04010  MAPK signaling pathway
sasa04120  Ubiquitin mediated proteolysis
sasa04140  Autophagy - animal
sasa04144  Endocytosis
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa05132  Salmonella infection
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106562692
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106562692
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106562692
   04140 Autophagy - animal
    106562692
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    106562692
   04621 NOD-like receptor signaling pathway
    106562692
   04622 RIG-I-like receptor signaling pathway
    106562692
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106562692
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106562692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106562692
   04121 Ubiquitin system [BR:sasa04121]
    106562692
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106562692
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    106562692
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    106562692
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF zf-TRAF_2 Phage_GP20 Sina_ZnF
Other DBs
NCBI-GeneID: 106562692
NCBI-ProteinID: XP_013983150
UniProt: A0A1S3KX06
Position
ssa11:39666625..39668641
AA seq 332 aa
SGGITLVCLFLFQLESHYDTDCPKAPIACTFSTFGCREMMQRNDLAQHMQEFTQMHMRCM
AEYLHRHSLTGYTQPPPSDDRGAAAAEQGAHAGASSSGAPCQCCGELQTMRETTQQLEGR
LVRQDHQLRELSIQAGLVAELRRKVTSLEENLKELEAKQCQGVYVWPLEGFSGYLRTQAA
GQPVVVHSPGFYTGRPGYKLCLRLHLQTPSAQRCSNYISLFVHTMQGEFDGQLSWPFQGT
IRLAVLDQGPEGQHHVEVMETKPDLQAFQRPTIQRNPKGFGYVTFLHLMELQQRGFVHDD
TLLVRCEVTPRFDTSLRREGAAMQPRGPEVSL
NT seq 999 nt   +upstreamnt  +downstreamnt
agtggtggaataactttggtgtgcctgtttttgtttcagttggaatctcactatgacaca
gactgtccaaaggctccgatcgcctgtaccttcagcacttttggatgtcgagagatgatg
cagcgcaatgacctggcgcagcacatgcaggagttcactcagatgcacatgcgctgcatg
gctgagtacctgcacaggcacagccttaccgggtacacccagccaccaccttctgacgac
cgaggggctgccgctgcagagcagggggcacatgcaggagctagcagcagtggcgccccc
tgccagtgctgcggggaactgcagaccatgcgggagaccacccagcagctggagggccgt
ctagtgcggcaggaccaccagctacgtgagctgagcattcaggcgggcctggtggcagag
ctccgtcgtaaggtcacttcgctggaggagaacctaaaggagctggaggccaagcagtgc
cagggcgtgtacgtgtggcccttggagggcttctcgggctacctgcgtacccaggctgcc
ggacagcccgttgtggtgcacagcccgggcttctacacgggccggccgggctacaagctg
tgtctgcgcctccacctccaaacgccctcggcccagcgctgctccaactacatctcactg
tttgttcacaccatgcagggtgaatttgatgggcagctgtcgtggcccttccaaggcact
atccggctggccgtgctggaccaagggcctgagggccagcaccatgtggaggtgatggag
accaagcctgacctgcaggccttccagaggcccaccatccagaggaaccccaagggtttt
ggctacgtcacctttctgcacctgatggagctgcagcagcgagggtttgtgcacgacgac
acgctgctggtgcgctgcgaggtgacgccgcgcttcgacacctccctaaggcgcgagggg
gcggccatgcagcccagagggcccgaggtctcgctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (9)   
   KEGG PATHWAY (9)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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