KEGG   Salmo salar (Atlantic salmon): 106562985
Entry
106562985         CDS       T04363                                 
Symbol
ddx56
Name
(RefSeq) DEAD-box helicase 56
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    106562985 (ddx56)
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106562985 (ddx56)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    106562985 (ddx56)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 106562985
NCBI-ProteinID: XP_013983628
UniProt: A0A1S3KY98
Position
ssa11:complement(55008925..55016544)
AA seq 559 aa
MATDRLQFHEMGIDDRILKALADLGWAQPTLIQEKAIPLALEGKDILARARTGSGKTAAY
AVPVIQRILSSKQNVREQAVRALILVPTKELGQQVQAMIRQLTVYCARDVRVADISGKAD
LSAQRPILMEKPDVVVGTPSRVLAHLSAHSLDLQASLETLVIDEADLLFSFGFEADLKSL
LCHLPKIYQSFLMSATLSEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSVQCEEEDK
FLLIYTLLKLHLVQGKTLVFVGAVERCYRLKLFLEQFSIPTCVLNSELPVHSRCHIITQF
NQGFYDYIIATDEQALADPTTTVQAAEGKGKKKKNAGRAKDKEYGVSRGIDFQNVSNVIN
FDFPTTVESYIHRVGRTARADNPGTALTFISHTELPLLADVEDALMGDNAECALKPYGFK
MEEIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKD
LHPAVIKPHLKNVPEYLIPPMLRGVANPMSGRKRRKRREKPKPDGVVKTTFKKDFRGKNP
LKSFRYIGGRSRGGKAGKS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggctaccgacaggctgcagttccatgaaatgggcatagatgatcgcattttgaaggcg
ctggcggacttgggctgggctcagcccactttgatccaggagaaagccattccactggct
ctggagggcaaggacattctagcccgggccaggactggctcaggaaaaacagctgcttac
gctgtgcccgtcatccagcgtatcttgtcatccaaacaaaatgtccgtgagcaggcagtg
agagcgttgatcctggttcctaccaaggagctggggcagcaggtacaggccatgatccgc
cagctgactgtctactgtgccagagacgtgagggtggcagacatctccggcaaggctgac
ctgtctgcccagaggcccatcctgatggagaagccagatgtggtagtggggaccccctct
agggtgctggcccacctcagtgcccatagcctggacctgcaggcctcgctggagacccta
gtcatagatgaggctgacctgctcttctccttcggcttcgaggctgacctcaagagcctg
ctgtgccacctgccgaagatctaccagtcgttccttatgtccgctactctcagtgaggat
gtccaggccctgaaggaactgctgctgcacaatcctgtgattctaaagctgcagggctcc
cagctgccagacagctcccagctgcagcagtacagtgttcagtgtgaggaagaggataag
ttcctgctcatctacaccctgttgaaactgcacctggttcagggcaagaccctggtgttt
gttggggcagtggaaaggtgctacagactcaaactgttcctggaacagttcagcatcccc
acctgtgtactcaattctgagctgcctgtccactccaggtgtcacatcatcacccagttt
aaccaggggttctatgattatatcatcgccacggacgagcaggcattggctgatcccacc
accacagtgcaggccgccgaggggaaagggaagaagaagaagaatgcagggagagccaag
gacaaggagtacggcgtctccagaggaatagacttccagaatgtctccaacgtcatcaac
tttgacttccccaccaccgtggagtcctatatccaccgtgttggacgaacggcacgagca
gacaacccaggcaccgctctcaccttcatctcacacacagagctccccctactggcagat
gtggaggacgcactcatgggagataacgccgagtgcgctctgaagccgtacgggtttaaa
atggaggagattgagggcttcagataccgctgccgggatgccatgcggtcagtgactaag
caggcggtgagggaggccagactgaaagagatcaaacaggagctgctcaactcagagaaa
ctcaagacatactttgaggacaacccccgagacctgcagctgctgaggcacgacaaagac
ctgcaccctgctgtcatcaagccacacctgaagaacgtaccagaatacctcatccctccg
atgctgaggggagtggccaacccaatgtccggcaggaagaggaggaagaggagagagaag
cccaaacctgacggggtcgtcaagacaacctttaagaaggacttccgaggcaagaacccc
ttgaagagtttccgctacattggggggaggagccgagggggcaaggctggcaaatcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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