KEGG   Salmo salar (Atlantic salmon): 106563067
Entry
106563067         CDS       T04363                                 
Symbol
RAB7A
Name
(RefSeq) ras-related protein Rab-7a-like
  KO
K07897  Ras-related protein Rab-7A
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04137  Mitophagy - animal
sasa04140  Autophagy - animal
sasa04144  Endocytosis
sasa04145  Phagosome
sasa04148  Efferocytosis
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106563067 (RAB7A)
   04145 Phagosome
    106563067 (RAB7A)
   04140 Autophagy - animal
    106563067 (RAB7A)
   04137 Mitophagy - animal
    106563067 (RAB7A)
   04148 Efferocytosis
    106563067 (RAB7A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106563067 (RAB7A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106563067 (RAB7A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106563067 (RAB7A)
   04031 GTP-binding proteins [BR:sasa04031]
    106563067 (RAB7A)
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    106563067 (RAB7A)
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106563067 (RAB7A)
  Exosomal proteins of other body fluids (saliva and urine)
   106563067 (RAB7A)
  Exosomal proteins of colorectal cancer cells
   106563067 (RAB7A)
  Exosomal proteins of bladder cancer cells
   106563067 (RAB7A)
GTP-binding proteins [BR:sasa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    106563067 (RAB7A)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW PduV-EutP ATP_bind_1 nSTAND3 Septin AAA_16 NTPase_1 AAA_22 AAA_7 DUF5992 AAA_24 G-alpha SRPRB AAA_5 ATPase_2 NB-ARC NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 106563067
NCBI-ProteinID: XP_013983765
UniProt: C0HBN0
Position
ssa11:56185531..56193027
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPAASSDSCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacacggcggggcaggagcggttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctcgtctacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccaaatcaaactgagagacgaccggcccgccgcctccagc
gacagctgctcctgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (107)   
   KEGG ORTHOLOGY (1)   
   RefGene (103)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (26)   
   Pfam (26)   
All databases (151)   

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