KEGG   Salmo salar (Atlantic salmon): 106565044
Entry
106565044         CDS       T04363                                 
Symbol
rbl1
Name
(RefSeq) RB transcriptional corepressor like 1
  KO
K04681  retinoblastoma-like protein 1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04110  Cell cycle
sasa04218  Cellular senescence
sasa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    106565044 (rbl1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106565044 (rbl1)
   04218 Cellular senescence
    106565044 (rbl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106565044 (rbl1)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    106565044 (rbl1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 106565044
NCBI-ProteinID: XP_013987117
UniProt: A0A1S3L821
Position
ssa12:33010439..33054791
AA seq 1057 aa
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGLPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILGRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSSAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCAIYIISKITK
DGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVEPTSGGKSLISAAEKA
DQSSREEALVQGEERGDLIQFYNSVYVLKIKGFAIRYAAPSMDNRMEAPPLSPFPSMRAQ
PLSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAF
SMEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgcggggagacgagtcagattccgactccgggcggacggacgagagttccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttgtctcaagaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggaacccccacgacagcctaga
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgcccttctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcttgcccagcatcttcaggttggaaaacaac
accccggatgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaagccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcacagatctcctggatacaccaaacttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtactgactgtgggggac
tttgacgagagggtgttccttggggcggatgccgacgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcacccttgccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagatt
ttcaagtcatgttcgcgggaccccatcgtagctattctgggcagagtaaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggaactgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatcctcgagaatgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgttgtcttgaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttctttaag
gtgattgaggtgttcatccgctcggaggagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggaacagcagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccacccccgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtccccgtcccttgcc
aagaggctcatgttcacgcccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacactgatccaggtgcagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccattccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagacctgtgcgtgaggctggacatctctgcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccagagctgatgaaa
gacagacacctggaccagctcctcctttgtgccatctacataatctctaagattacgaaa
gatggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccggcccagcagcaccagagaacagccctcagacgag
aacatggaagtggaacccacctctggtggaaaatccttaatttcagctgctgagaaagcc
gaccagagcagcagagaggaggctcttgtccaaggcgaggagcgaggcgacctcatccag
ttctacaactctgtctatgtgctgaagattaagggctttgccatccgatacgccgccccc
agcatggacaacaggatggaggcccctcctctgtccccgttcccctcgatgagagcccag
cccctgtccccccgccgcatctcccagagacactcgatctacgtgtccccacacaagaac
ggctcctgtctcacccccaactctgcctacacctacaagatcaacggcagcccctccaaa
gaactgactgacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttt
tccatggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgag
gatgtgctgctcaaacgtctgcaggacgtggtcagcgagagagcccaccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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