KEGG   Salmo salar (Atlantic salmon): 106566845
Entry
106566845         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like
  KO
K08883  tripartite motif-containing protein 33 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sasa01001]
    106566845
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106566845
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106566845
Protein kinases [BR:sasa01001]
 Serine/threonine kinases: Other
  TIF1 family [OT]
   106566845
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106566845
SSDB
Motif
Pfam: Bromodomain zf-B_box PHD zf-RING_UBOX
Other DBs
NCBI-GeneID: 106566845
NCBI-ProteinID: XP_013990785
UniProt: A0A1S3LIX7
Position
ssa13:26136752..26156701
AA seq 1325 aa
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVNPPISIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEDSISSNVSPVGNTNGGTTELKNVNAVIVIESNSKEGED
SQSQENISQVPTPANVSEGGDASSNSAGAVEEGSTSSSPVGNTNGGTTESSAAGDTAGTS
PTLTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQ
LRQQHMQQQAFAQQKQQQQHQHQQHQQQQQQHQQQHQQQHQQQHQQQHQQQQQQQQQQQH
QQQQQHQQRIQEQMRIASQISQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPNMYPP
HHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQMTVDSEMSDHRFRLLHLTGHSN
PGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLPCL
PNIPPIQLEDAGSSSLDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSNSH
TPVRPSSTSSTGSRGSCGSAGRPGPASGPMEQQVRVKQEPGAEKECGFSGTTTSNVKTEQ
GKDGGRSACMMSSSESRRTPPLPVLGSVTSGSSVQDILKKVGEHVKTEPQDQEACSGANR
PGNAPITTSSTSTVASAALLTNGKGAASAALRSPRTAQGTNQSGAGGKEDDPNEDWCAVC
NNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRGEKDN
SEQGLSPEDQRRCERLLLYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLK
HVQHYQSPKDFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYF
EERLLELYPDESFPEVPEEPEVPEVPEEPQAPAGEEADLTEDSEDEFVQPKRKRLKTDEK
PMHIK
NT seq 3978 nt   +upstreamnt  +downstreamnt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
cagggagaggatagcggagacccagaattgaaagatgtgaatccgccgatttccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
ccagctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaagacagcattagcagtaatgttagcccagttgggaacaccaatggcgggacaacc
gaattgaaaaatgtgaatgcggtgattgtcatagagtcgaactcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcgaaggaggg
gacgctagcagcaacagcgcgggcgcagtggaagaaggcagcactagcagcagcccagtt
gggaacaccaatggggggacaaccgagtcctcggctgctggggatacagctggaacctca
ccaacactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacataattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgcagataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggttaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgggactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcatcgagacacacatggtcaaactgcaggagaaaaagacctac
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagccgtgttcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagacagacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagtggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggtcctgaaggctggactggagccagtgcctcaggctaacggagct
gttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagtagggaac
ctggtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatc
tccccgggccacggccacccgggccatggcaaaagcccggggcagatcaacctggcccag
ctccggcagcagcacatgcagcagcaagccttcgcccagcagaaacaacagcagcagcac
caacaccaacaacaccaacaacagcagcagcagcaccaacaacagcaccagcagcagcac
caacagcagcaccaacagcagcaccaacagcagcagcaacagcagcagcaacaacagcac
caacaacagcagcaacaccaacagaggatccaggaacagatgcgtattgcctcccaaata
tcccagcagcaccccaggcaggctgtacctcagatggtacagcagcagcccccgcgcctc
atcagtatgcaggcccagcagaggggccccatgaacggcgggcccaacatgtaccccccc
caccacctgcgcctgcccccaggacagggccgcatgcccagctccagcgcccagccacgc
atgcccaacggccagcagtactcccccatgatgcagcctcagctgcagagacagatgact
gtagattctgagatgagcgaccacaggtttcgtttgttacatctcactgggcattcaaac
ccaggtcatgctggacccttcccagtggcatctctccacaacgtgagcgctgccaacccc
accagtcccaccagtgccagcatggccagcgcccatgcccaccgtggccccgccagcccc
atagtgggcgccatcgacctcatcccctccgtcaccaacccagagaacctgccatgccta
ccaaacatcccccccattcagctggaagacgcgggctccagcagcctggatgccctactg
agtcgctacatcttagccagcacataccctcagctgggcctggggccccccgggaacatg
aacctctcccacggaccctccacacactcccctggctcctcaggcttatcaaactcccac
acgcctgtgcggccatccagtacgtccagcacaggaagcaggggcagctgtggatctgcg
ggtaggccagggccagcaagcggcccaatggaacagcaggtcagagtcaagcaggagccc
ggtgccgagaaggagtgtggtttctcgggaaccaccacctccaacgtcaaaacggaacaa
gggaaggatggagggaggagcgcatgcatgatgagtagttcagagagcagacgtactccc
cctctccccgtgttgggctctgtgacttctggctcctctgtccaggacatcctcaagaag
gtgggggagcatgtcaaaactgagccccaggaccaggaggcctgcagtggggccaacaga
cctggcaacgcccctatcaccaccagcagcacatccactgtggcctctgccgcactgctg
accaatggcaagggagccgcgtctgctgccctgcgctctccacgcactgcacaggggacc
aaccagagcggtgcaggagggaaggaggatgaccccaacgaggactggtgtgctgtgtgc
aacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccacatcacctgt
cacatccccaccttgaagtgctccccgagtggagagtggatgtgcacgttctgccggagc
ctggcaagcccggagatggagtaccagcctgacgacgagcctcgtggcgaaaaggacaac
agtgagcagggcctgagtcctgaggaccagaggaggtgtgagcgcctcctgctgtatgtt
ttctgccatgatctcagtgaggggttccaggagcctgtccctccctctatccctaattac
tacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagctacagttgaag
catgtccaacactaccagagcccgaaggattttgtctcggatgtgcgcctggtcttcagc
aactgtgccaagtacaacgagatgtctcgaataatccaggtatatgatgaggagaaacag
agtaatgtgcaggcggactcagaggtggcggaggcagggaaagctgtgagtttgtacttt
gaggagaggctgctggagctctatccagatgagagtttccccgaggtaccagaggagcct
gaggtaccagaggtacctgaggagccccaggccccagctggagaggaggcggatctcaca
gaagactccgaggatgagtttgtgcagcctaaacgcaagcggttaaaaacagatgaaaag
ccgatgcacatcaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (63)   

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