KEGG   Salmo salar (Atlantic salmon): 106569317
Entry
106569317         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin-protein ligase mib1-like
  KO
K10645  E3 ubiquitin-protein ligase mind-bomb [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106569317
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106569317
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106569317
SSDB
Motif
Pfam: Ank_2 Ank_4 Ank_5 Ank SH3_15 MIB_HERC2 Ank_3 zf-C3HC4_3 ZZ zf-C3HC4_2 Sina_RING Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 106569317
NCBI-ProteinID: XP_013996021
UniProt: A0A1S3LYW5
Position
ssa14:32273583..32372662
AA seq 1046 aa
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECNNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTSGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPTGSAVTNASGERLSQLL
KKLFETQESGDVNEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLAKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTMRNKKGQSPLDLC
PDPSLCKALAKCHKEKISGQVGSRSPSLNSNGETLEECMVCSDMKRDTLFGPCGHIATCS
LCSSRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCAGLMKKCVQCR
AVVERRTPFVLCCGGKGMEGDAADDDDDDDDDDEDLTGNSNSALMAGGSLDLLQPNNLAL
SWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQVSMVTMCPVCLDRLKNMIFICGHG
TCQLCGDRMSECPICRKAIERRILLY
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgactaccggcaggaataaccgtgtgatgatggaaggagttggtgcaagagtgatccgt
ggacccgattggaaatggggaaaacaggatggtggagagggacatgtcggcaccgtcagg
agttttgaaagtccggaagaagtggttgttgtctgggataacgggactgcagccaactac
cggtgctctggtgcatacgacgtgaggatatttgatagtgctcccacaggtatcaagcat
gacggcaccatgtgcgacacctgtcgtcagcagcctatcatcgggatccgctggaagtgt
gctgaatgcaacaactatgacctctgcaccacctgttaccatggagacaagcaccacctg
cgacatcgcttctacaggatcactacccctggtagcgagagagtcctgttggagtctcgc
cgtaagtcaaagaaaatcacagcccgaggcatcttcaccagtggccgggtggtgagagga
gtggactggcagtgggaggatcaggatggaggcaacggaaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctatgtcctctgggacaatggg
gccaagaacctctacagagtggggttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttctacagagatcactgccctgttctaggtgagcagaatggcaac
agaaacccaggcggtttgcagatcggagacctggtcaacatcgacctggacctggaaata
gtccagtccctgcagcacggccacggaggctggacagacggtatgtttgagactctcacc
accaccggtaccgtgtgtggcattgacgaggaccacgacattgtggtgcagtaccccagt
gggaacaggtggacgttcaaccctgcggtgctgaccaaggccaacgtggtgcgtagtggg
gaaggtgttgcggcgggggcagagggaggcagctcccagttcctggtgggagacctggtc
cagatctgctacgacatcgaccgcatcaagctgctgcagagaggccatggggagtgggct
gaggccatgctgcctaccctgggcaaggtgggccgcgtgcagcagatctactctgacagc
gacctgaaggtggaggtgtgtggaacgtcatggacctataaccctgctgccgtcaccaag
gtggcccccactggctctgctgtcaccaatgcctccggagagcgtctgtctcagctgctg
aagaagctgtttgagacccaggagtcgggtgacgtcaatgaggaactggtcaaagcagca
gccaatggagacctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaac
gggcagtgtgctggacacacagccatgcaggcggccagtcagaacggtcacgtggacgtc
ctcaagctgctgctgaaacacaacgtggacctggaggctgaggacaaggatggagaccgg
gcggtgcaccacgcgtccttcggagacgagggctctgtgatcgaggtgctgcagaggggc
ggtgccgacctgaacgccaggaacaagcgcagacagacccccctgcacatcgctgtcaac
aaaggccatctgcaggtggtcaagaccctgctggactttggctgccacccaagcctccag
gactccgagggagacacgcccctgcatgacgccatcagtaagaagagggacgacatgctt
tctgtgctgctggaggcgggagctgacgtcaccatcaccaacaacaatggattcaacgcc
ctgcaccacgccgccctgcgagggaaccccagtgccatgcgtgtgttgctggccaagctg
ccgcggccctggatcgtagatgagaagaaagatgatggttacaccgccctgcacctggcg
gcgctcaacaaccacgtagaggtggccgagctgctggttcaccagggcagtgccagcctg
gacatccagaacgtcaaccagcagacagccctgcacctggctgtggagagacagcacaca
cagatagtcaggctgctggtgcgagcagaggcaaagctggacgtgcaggacaaggatggg
gacactcctctccacgaagcgctgcgtcaccacacgctgtcccagctccgccagctgcag
gacatgcaagacgtgagcaaggtggagccctgggaaccctccaaaaacacgctgatcatg
ggcctgggcacccagggagcagagaagaagagtgcagcgtccatcgcctgcttcctggca
gctaacggagcagacctgaccatgcgcaacaagaagggccagtcccctctggacctctgc
cccgaccccagcctctgtaaggccctggccaagtgccacaaggagaagatcagtggccag
gtgggctctcgcagcccgtctctgaacagtaacggtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccatgcggacacatcgccacctgctct
ctctgctcctcccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagatcgaggagtgtgtcgtatgttctgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgaaaactgtgccggcctcatgaagaagtgcgtacagtgccgg
gctgttgtggaacgccgcacgccctttgtcctttgttgtggagggaaaggtatggagggt
gatgccgctgatgatgatgatgatgatgatgatgatgatgaggaccttacaggtaactct
aactcagctctaatggcagggggctcgctggatctgctccagcccaacaatctggcgcta
agttggtccagcggaaatatcccggccatgcagagagacaaagacaacaccaatgtcaac
gctgacgttcagaaactgcagcagcaactgcaggacatcaaggagcaggtaagcatggtg
accatgtgtccggtgtgcctggaccggctgaagaacatgatcttcatatgtgggcacggc
acttgccagctgtgtggcgaccgcatgagcgagtgccccatctgccgcaaggccattgag
aggcgcatccttctgtactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (49)   

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