KEGG   Salmo salar (Atlantic salmon): 106570092
Entry
106570092         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106570092
   04121 Ubiquitin system [BR:sasa04121]
    106570092
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106570092
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    106570092
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106570092
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-RING_5 zinc_ribbon_9 zf-ANAPC11 zf-C3HC4_3 HypA C1_2 Rad50_zn_hook
Other DBs
NCBI-GeneID: 106570092
NCBI-ProteinID: XP_013997550
UniProt: A0A1S3M3F7
Position
ssa14:complement(52789204..52801460)
AA seq 302 aa
MAEAAAAQQHRFFCHCCKGEIDPKFPEFTCPRCESDFIEELTEDSSILENSRAAEANDDA
GTLFSELWQLLFMERSALLSDPSAYESDQSHLQAAAASDAVEEELEGPSVDPAGGTEPLE
PEPERPSRPPSQGRRPSRAPAVEGIVQQFLAGLFANNGNPGVAPAALYGMFHSNPGDYAW
GQGGLDAVITELLGQFECTGPPPAEKEMISSLPTVNISQEQTDSRLECPVCREEYSVGES
VKQLPCLHYFHSDCIVPWLKLHDTCPVCRKSLDGVDQSIQPPPEPPEPPSIRTDTQEERR
AI
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcggaggcagcagcggcacaacaacaccgctttttctgtcactgctgtaaaggtgaa
atcgaccctaaattcccagaattcacgtgccccaggtgtgagtccgatttcattgaggag
ttgacagaagactccagtatcttggagaacagccgcgctgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacgctctgcccttctctcg
gacccctccgcctatgagtctgaccagagccacctacaggctgccgcagccagtgatgca
gtggaggaagaactggagggcccttctgtggaccctgcgggaggcacagagcctttggag
cctgaaccggaacgcccctctcgcccgcctagccaggggaggcgaccgtcccgcgcgcca
gcagtggagggtattgtgcagcagtttttggctggtctgtttgccaacaatggaaatcca
ggcgtcgcaccagctgcactgtatggcatgttccattcaaatccaggggactatgcctgg
ggtcagggaggtctagacgcagttatcacagagttgttaggtcagtttgagtgcacaggt
ccgcctcctgcagagaaggagatgatctcatccctccccacagtcaacatctctcaagaa
cagacagacagcagactggagtgtccagtatgtagggaggagtactccgtgggagagtct
gtcaaacagctgccctgcctccattatttccacagtgactgcatagtgccatggctcaaa
ctgcacgatacctgtcctgtgtgtcgtaaaagccttgacggcgtcgaccagagcatccag
cccccaccagaacccccagagcccccctccatcaggacagacactcaggaggagagacgg
gctatttga

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