KEGG   Salmo salar (Atlantic salmon): 106570608
Entry
106570608         CDS       T04363                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106570608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106570608
   03032 DNA replication proteins [BR:sasa03032]
    106570608
Spliceosome [BR:sasa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    106570608
  U2 snRNP components
    106570608
 Complex B
  U1 snRNP components
    106570608
  U4/U6.U5 tri-snRNP components
    106570608
 Complex C
  U2 snRNP components
    106570608
DNA replication proteins [BR:sasa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     106570608
SSDB
Motif
Pfam: LSM Gemin7 Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 106570608
NCBI-ProteinID: XP_013998545
UniProt: A0A1S3M660
Position
ssa14:complement(84533303..84540467)
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaaactcgtacgttttttgatgaaactcagccatgagactgtgaccattgagctgaag
aatggaacccaggtccatggaactatcacgggtgtggatgtgagtatgaacactcacctg
aaggcggtgaagatgactctgaagaaccgcgagcccacccagctggagagcctcagtatc
cgtggcaacaacatcagatacttcatcctgccggacagtctgccactggacaccttgctg
gtcgacattgaacccaaggtcaagtccaagaagagagaggctgtggctgggcgtggaagg
ggcagaggaagagggcgtggcagggggaggggccgaggcaggggagggcccaggagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (56)   

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