KEGG   Salmo salar (Atlantic salmon): 106590434
Entry
106590434         CDS       T04363                                 
Name
(RefSeq) spermatogenesis-associated protein 13-like
  KO
K05769  Rho guanine nucleotide exchange factor 4/29
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    106590434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106590434
Membrane trafficking [BR:sasa04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    106590434
SSDB
Motif
Pfam: RhoGEF SH3_1 PH SH3_9 SH3_2
Other DBs
NCBI-GeneID: 106590434
NCBI-ProteinID: XP_014036950
UniProt: A0A1S3QAE1
Position
ssa29:25830536..25865572
AA seq 1361 aa
MEFLCLNFASYKCPCSQRSLCQRSISGIDFIPYYNWFCVILERGFLGLSRAGQSDAALST
SDDSLSCRDGSSTDPDLQPRAWPRPLCDLYPTQGHLERAPPPSLLSGCGAQVQLVTSDPH
SEESRLNGLNTDTWSSPVIGHPEMKPYPSRIRRLFSTQRKCTVPGDSSGPTRPLSFQGPP
SSAGGPQAWPVLSGLAVMGSFKKLRSSVLQGIQNRGTANPDEEYISIANQGEDNGMVITN
QSLRLRCGEGYRVSSRVSIGQQMAGMSPYGSDNEEEEEVVDKEDGLQRNTRFSRSIRRAY
GAGRISLLDTGQNGERREGPGQGVSSNQRPGLGSSSGSEVNLHSEESVNVLSRLSKSADN
LHLKAPFRRKAPSPSPNDSPGTLGSEAANVGPSIQRSASASSVDLRDRSQSPGRLRSPLG
ARGHMLKLVGSMTDLTVRRRPNPSPVTCLGSPVTPLSPLSRLHDDYSRRTPCLPASDRQR
RPSPARTRNVTLVSPEHTPTIHPRPQGRPDHVFSFPTYSEPLATTSSPLRSSLCEGGRPQ
EGRGDGWRAQCDSPPLPQGEPCESHSKHQPEVNAEVKTEPKLCIWTRPDQDQEELEDTSD
EQGREALLGGEEAPSPSATGTPLTPTCSLDSPTSPMLTTSPTATGATETSTSVTPRRRAG
RSRPRPISDYAQLVARKYAIPEEEAELHPEERTTNGSPCQDFKCNGGSQDSDSPENYNMN
GDLQCRRRRPMSVIGGVDLYSSPGAEEREDRLPSPLSRPPVPSHQVPSYRAVSARFRPST
FSQSTPIGLDRLGQRKLHRVLSADGGSECCAAVDGDSVSEEEGSFDELSDVTTYLQPGVG
LSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRVLEAPHKDWWWGMGPDREAWF
PSSFVRVRVNQEEDSGAESVERCALDQENPHTAPRDTHSAEHRHQMRTNVVKEIMNTERI
YIKHLRDICEGYIRQCGKNPGMFTELQLKTIFSNIEDIYKFQRQFLKDLERKYNTDQPHL
SEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEACRLLQQMIDISIAG
FLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYEAMKNVASLINEGKRRLESVDAI
AHWQVAILRWEGADVLERSSELIHSGELTRIVCQGNKTQQRSFFLFDHQLVFCKKDVLRR
DLLYYRGRLDMDHTELLEMPDGRDPELGMSLKNALRLRNSTTLETLCYLCCRKPQDRQRW
LQAFARERRRVQEDQEMGMKISETQRKQAIFNARKSRQGKMKTIGYSGTVPPHHQPLHPI
HQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTRHTFFRK
NT seq 4086 nt   +upstreamnt  +downstreamnt
atggagttcttatgtttgaactttgcctcatataaatgtccttgttctcagagaagctta
tgtcaaaggtctatcagtgggattgattttataccctactataactggttctgtgtcatc
ctggaaagaggtttcctgggcctctcaagggcggggcagagcgacgcagccctgtctacc
agcgatgactccctctcctgtcgcgatggctcctccaccgaccctgaccttcaacctcga
gcctggcctcgacccctctgtgatctttaccctacccagggtcacttggagagggcgccg
ccaccgtccctgctgtctgggtgtggtgcccaggttcagcttgtgacctctgacccccac
agtgaggagagtagactgaacgggctcaacacagacacctggtccagccctgtgataggc
caccctgagatgaagccctacccctccaggatcaggaggctcttctctacccagaggaag
tgcaccgttcctggggacagttcgggccctaccaggcccctctccttccagggccctcca
tccagtgccgggggcccgcaggcttggccagtcctgtcagggcttgccgtcatgggctcc
tttaagaagctgcgctcctcagtgctccaaggcatccagaaccgagggacagctaatccg
gatgaggagtacatctcaatagccaaccagggtgaagataatggaatggtcataaccaat
cagagcttaagactgaggtgtggggagggctatagagtgtccagtagggtgtctattggt
cagcagatggctgggatgagcccttatggttctgacaatgaagaagaggaggaagtagta
gataaggaagatggactgcagagaaacacacgcttttcaaggagtatccgcagagcatat
ggggcggggcgcatctcactgctggacaccgggcagaacggggaacgcagggagggtcca
ggacagggggtttcatccaatcagaggccaggtttaggctccagttcagggtcagaggtg
aacctccattcggaagagagcgtcaacgtgctgagcagactaagcaagagcgcagacaat
ctacaccttaaggcccctttcaggcgcaaagccccatctccctctccaaatgactcacca
ggtacccttggctctgaagcggccaatgtgggccccagcatacagagatcagccagtgcc
tcgtccgtggaccttagggaccgcagccagagccccggtcgccttaggagtcccctaggg
gccaggggccacatgttgaagctagtgggcagcatgactgacctgaccgtgagacgcagg
cctaacccgtcccccgtcacttgcctgggctcccccgtgactcccctgtcccccctcagc
cgtctccacgacgactactcccgccgtacgccctgccttcccgccagcgaccgtcaacgg
cggccctcgcccgccagaacgaggaacgtcactctggtatcaccggaacacaccccaacc
atccacccccgcccccagggaagaccagaccatgtcttcagtttcccaacctatagtgaa
cctctcgctacaacctcatctcccctgaggagcagcctgtgtgaggggggtaggcctcag
gagggacggggagacgggtggagagctcagtgtgactcccctccactcccccagggggag
ccatgtgagagccacagcaaacaccagccagaggtcaacgcagaggtcaagacagaacct
aagctgtgcatatggaccagaccagaccaagatcaggaggagctggaggacacgtcagat
gaacagggtagagaggcactattagggggtgaagaggcgccctctccttcagccaccggt
acccctctcaccccaacatgttccctagattctcccacctcacccatgttaaccacatca
cccacggcaacaggcgcaacggaaacgtccacgtccgtcacccctagacggagggctggg
cgatcgaggcctcggccaatctctgactacgctcagctggttgccaggaagtacgccatc
cccgaggaggaggcggagctacatcctgaggagaggactacaaatggatctccctgtcag
gactttaaatgtaatggaggctcgcaggacagtgacagcccagagaactacaatatgaat
ggagatctccagtgccggaggagacggcctatgtctgtgattggaggagtggatctgtac
tcttcacctggcgctgaggagagggaggaccgcctgccgtctcccctgtcacgcccacct
gtcccgtcccaccaggtgccctcctacagggctgtgtcggccaggttccgcccctccacc
ttctcccagagcacccctattggactggaccgccttggacaacgcaaactacacagagtc
ctcagtgcagacggaggctcagagtgttgtgcagcggtggatggtgacagtgtgagtgag
gaggaggggagcttcgatgagctcagtgatgtcacaacgtacctgcagcctggggtgggg
ctgtctgctctcagccagtggatcagccagggtcaagctgtgtatgcggaggccctgtgg
gaccatgtgacgatggaggagcaggagctggcgttcaaggcgggggatgtgatccgggtg
ctggaggcccctcacaaggactggtggtggggcatggggccagacagggaggcctggttc
ccctccagcttcgtcagggtgcgtgtgaaccaggaggaggactctggagcggagagtgta
gagcgttgtgctctggaccaggagaacccacacactgccccccgggacacacacagcgct
gagcaccgccaccagatgaggaccaacgtggtaaaagagatcatgaacacagaacgcatc
tacatcaaacacctccgggacatctgtgagggttatatccgtcagtgtggtaaaaaccca
ggcatgttcactgagctgcagctgaagaccatcttcagtaacatcgaggacatctacaag
ttccagagacagttcctcaaagacctggagaggaagtacaacacagaccagcctcacctc
agtgagataggagcctgtttcctcttacagggggagggtttttccatctactctgagtac
tgtaacacccaccctgcagcgtgtggggagctgcagcgcctcatgaagctgggcaggtac
aagcacttctttgaggcctgtcggctgctgcagcagatgattgacatctccatcgctggc
ttcctgctcacgcccgtccagaagatctgcaagtaccccctgcagctgggagagctgctc
aaatacacccccaaagaccacagtgactacggtggagtgagtgacgcgtacgaggcgatg
aagaacgtggcgagcctcatcaatgaggggaagaggcggctggagagtgttgacgccatc
gctcactggcaagtggccatcctacgctgggagggagcagacgtgttggagcgcagctcg
gagctgatccactctggagagctgacccggatcgtctgccagggcaacaagacacagcag
cgcagcttcttcctgttcgaccaccagctggtgttctgtaagaaggacgtgctgcgccgc
gacctgctgtactaccgcggccgcctggacatggaccacacggagctgctggagatgccc
gatggcagggaccctgagctgggcatgtcgctgaagaacgccctgcggctccggaacagc
accactctggagaccctgtgttacctctgctgcagaaagccccaggacagacagcgctgg
ctgcaggccttcgccagggagagacggagggtacaggaggaccaagagatgggaatgaag
atcagtgaaacgcagcgaaaacaagcaatcttcaatgcgaggaaatcccgacaagggaaa
atgaagaccattggctactctggcactgtcccgccccaccaccagcccctgcatccaatt
caccagcgccacgttaccgtgccaaccagcgtgcctcagcagcaggtgttcacattggcc
gagcccaagcgaaagcccgcccacctgtggtacaccttcacccgacacaccttcttcagg
aagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (58)   

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