KEGG   Salmo salar (Atlantic salmon): 106599428
Entry
106599428         CDS       T04363                                 
Symbol
dhx9
Name
(RefSeq) DExH-box helicase 9
  KO
K13184  ATP-dependent RNA helicase A [EC:5.6.2.6]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106599428 (dhx9)
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106599428 (dhx9)
Spliceosome [BR:sasa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106599428 (dhx9)
SSDB
Motif
Pfam: dsrm OB_NTP_bind Helicase_C DEAD HA2_N HA2_C Dicer_dimer ResIII AAA_19 nSTAND3 AAA_14 ATPase
Other DBs
NCBI-GeneID: 106599428
NCBI-ProteinID: XP_014046137
UniProt: A0A1S3R2Q4
Position
ssa03:complement(21226859..21258536)
AA seq 1284 aa
MADIKNFLYAWCGKKKLTPSYDIRAAGNKNRQKFLCEVRIEGFNYTGMGNSTNKKDAQAN
AARDFVNYLVRVGEMNAAEVPALGASGPDFSVPDCGGGVDGGNVSFGSLPPSGPIPPHLV
VKAEQVNAPSAPVPGVTGLGYSGGSGDYSGGGANSNAPWDRGANLKDYYSKRDEQEAQAT
LESEEVDLNAGLHGNWTLENAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMQLFVR
QLGRKIIAREHGSNKKLAAQSSALSIVRQLYHLGVIEPYSGVTKKKEGEILEAFEVNVVD
DLQHQLQSMAQELGVVIPPPPPDPSTPVSLVQGKMAVFEPSQRQSMAGVVPWSPPQVNWN
PWTSSNIDDGPLAFCTPEQISTDLHHELTYQLEQDQSLQKVIGERDGLPVKNFEEEIMTA
VQGSSVVIIRGATGCGKTTQVPQYILDQFIKSGRASECNIIVTQPRRISAVSVAERVSYE
RGEDVGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINT
DFLMVVLRDVVQTYPEVRIILMSATIDTTMFREYFFNCPVIEVFGRTFPVQEYFLEDCIQ
MTHFIPPPSDRKRKDKDEEGGDEEANCNVICGPEYTPETKRSMAQMNEKETPFELVEALL
KYIETLQVAGAVLVFLPGWNLIYSMQKHLEMNPHFGSQRYLILPLHSQIPREEQRRVFEP
VPENITKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWGSKTNLEQR
KGRAGRVRAGFCFHLCSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAI
EPPPLDAVIEAEHTLRELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVC
TISAASCFPEPFINDGKRLGYVHRNFAGTRFSDHVALLSVFQAWDDVRMGGEDAESRFCE
HKRLNMSTLRMTWEAKVQLKEILINSGFPEECLMTQMFNNVGPDNNLDVVISLLTYGSYP
NVCYHKEKRKILTTEGRNALIHKCSVNCPFSSQDMTYPSPFFVFSEKIRTRAISAKGMTL
VSPLQLILFASKKITSNGEIIELDDWIKLKIPHNVAGCIAALRAGMEALVVEVTKDPEYI
KQLDPTNERMLNIIRQISKPSAAGLNLMVNNKRFGDGPRPPKMGRFDGGGGGYQGGGGGS
GYRGGGGSGYRGGGYRGGGGYQGGGGYRGGGGGYRGGGGYGGGNRGGGGYRGGNWGGGYG
GGNRGGGGYGGGNRGGEYRGGQGY
NT seq 3855 nt   +upstreamnt  +downstreamnt
atggcggacatcaagaacttcctgtatgcttggtgtgggaagaagaaactaacacccagc
tatgacattcgagccgctggaaacaaaaaccgacagaagtttctgtgtgaggttcgtatt
gagggattcaactacactggaatgggaaactccaccaataagaaggatgcccaggcaaat
gctgctagagactttgtcaattatcttgtccgagttggagaaatgaatgcagcagaagtc
ccagcccttggggcaagtggacctgacttcagtgtgcctgactgtggaggaggggttgat
ggagggaacgttagctttggaagtcttcctccaagtggacctatccctcctcacctggtt
gtgaaagctgagcaagtgaatgcaccttctgcgccagtcccaggtgtcactggtttggga
tattcgggcggtagcggtgattattccggaggtggcgcaaacagcaatgctccgtgggat
cgtggggctaatctaaaggactattactcaaagagagatgagcaggaggcacaggcaact
ctggagtctgaggaggtagatctgaacgcaggactccatggcaactggactttagagaac
gccaaggcccgtctgaaccagtttttccagaaggagaagaatcaaacagattacaaatac
agccaagttgggcctgaccacaacaggagctttattgctgagatgcagttatttgtaaga
cagcttggtagaaagataattgcccgtgagcatggctctaacaagaagcttgcggcccag
tcctctgcgctgtctatcgtccgtcaactttaccatctaggtgtcattgagccttattct
ggcgttactaagaagaaagagggggaaattttggaagcttttgaggtgaatgtggtggat
gatctgcaacatcagctgcagagtatggcccaagaactgggtgttgtaattccacctcca
ccacctgatccaagtactccagtgtctttggtccaagggaagatggctgtgtttgagccc
tcccagagacagagcatggctggggtggtgccctggtcccctccgcaagtcaactggaac
ccctggaccagcagcaatattgacgatggaccactggcattttgcaccccagagcaaatc
agcactgacctccatcatgagctgacttatcaattggaacaagatcaaagcttacagaag
gtcattggggagcgagacgggcttccagtgaagaactttgaggaggagataatgactgcc
gttcagggcagctcagtggtgatcattcgaggggcgaccggctgtggcaaaaccacccag
gttcctcagtacatcctggatcagttcatcaagagtgggagggcatccgagtgtaacatt
attgtaacccagccccggcgtatcagtgcagtgtctgtggcagagcgtgtttcctacgag
agaggagaggatgttggtaagagctgtgggtacagcgtccgctttgaatccatcctccca
cgaccccatgccagcatcatgttttgcactgttggtgtgttactgcggaagctggaagca
ggtattcgcgggatcagccatgtgattgtggatgaaatccacgagagagacatcaatact
gacttcctcatggtggtgctgagggacgtggtccagacctacccagaggtccgcatcatc
cttatgtctgccaccatcgacaccaccatgttcagagagtacttcttcaactgccctgtc
atcgaggtgttcggccgcacattcccagtacaagagtactttttggaagattgcattcag
atgacgcatttcattccacctccgagtgatagaaagaggaaggacaaggatgaggaagga
ggagatgaagaggccaactgtaatgtgatatgtgggccagagtacaccccagagactaag
cgctccatggcccagatgaatgagaaggagactccctttgagctggtggaggccctgctg
aagtacatcgagaccctccaggtggccggggccgtgcttgtcttcctgcccggctggaac
ctcatctactccatgcagaaacacctggagatgaacccacactttgggagtcaacggtac
ctgattctgcctctccactctcagatccccagagaggagcagaggagggtatttgagcct
gtacctgaaaacatcaccaaggtgatcttatcaacaaacattgcagagaccagtattacc
atcaatgatgtagtatatgtcatcgactcttgcaagcagaaagtgaaactgttcacgtct
cacaacaacatgaccaactacgccacggtctggggctccaagaccaacctggagcagagg
aagggtcgcgccggccgcgtccgggctggcttctgcttccatctgtgtagcagagcacgc
ttcgacaaactggagacccatatgacccctgagatattccgtactcctctccacgaggta
gccctgagcatcaagctgctgagactaggagccattggccatttcctttccaaggccatc
gaaccccctcccctggacgcggttatagaggcagaacacacactgagagaactggatgct
ttggacacaaacgatgagttgaccccgcttggtcggatccttgcaaagcttccaatcgag
ccgcgtctggggaagatgatgattatgggctgcattttcaatgttggagatgcggtgtgc
acgatctcagcagcctcctgcttcccagagcccttcatcaatgatggcaagcgcttgggc
tatgtgcaccgcaactttgctggcacccgcttctcagaccacgtggcccttctgtcagtc
ttccaggcttgggacgatgtgagaatgggaggtgaggatgcagagtccagattctgtgaa
cacaagaggctcaacatgtccacactgaggatgacctgggaggccaaagtgcagctgaag
gagatcctcatcaactctggcttccctgaggagtgcttgatgacacagatgttcaataac
gttggacccgacaacaaccttgacgtggtcatctctctcctgacgtacggttcctatccc
aacgtgtgctaccacaaggagaagaggaagattctcaccactgaggggcgcaatgccctc
atccacaaatgctccgtcaactgccccttcagcagccaggacatgacctacccatcaccg
ttcttcgtctttagcgaaaagatccggactcgagccatctcagccaaaggaatgacacta
gtcagcccactccagctgatcttgtttgcctccaagaaaatcacatcaaacggggaaatc
attgaactggatgattggatcaaactgaagataccgcataacgtggctggctgcatagct
gctttgagggctggaatggaggcacttgttgttgaagtcaccaaagaccctgagtacatc
aaacagctggatcccacaaacgagcgcatgctcaacatcatccgccaaatctccaagccc
tccgcagctgggcttaacctcatggtcaacaataaacgttttggagatggtccacgtcct
cccaagatgggcaggtttgacggaggaggcggagggtaccagggaggaggtggcggctct
ggatacaggggaggaggcggctctggatacaggggaggaggttacagaggcggtggagga
taccagggtggcggcggatacaggggcggtggtggaggttacagaggtgggggtggttat
ggaggggggaacaggggtgggggtggttatagaggggggaactggggtggtggttatgga
ggggggaacaggggtggtggtggttatggaggggggaacaggggtggtgaatacagaggg
ggccagggatattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

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