KEGG   Salmo salar (Atlantic salmon): 106601022
Entry
106601022         CDS       T04363                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04137  Mitophagy - animal
sasa04144  Endocytosis
sasa04145  Phagosome
sasa04148  Efferocytosis
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106601022 (RAB5C)
   04145 Phagosome
    106601022 (RAB5C)
   04137 Mitophagy - animal
    106601022 (RAB5C)
   04148 Efferocytosis
    106601022 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106601022 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106601022 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106601022 (RAB5C)
   04031 GTP-binding proteins [BR:sasa04031]
    106601022 (RAB5C)
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    106601022 (RAB5C)
 Endosome - Lysosome transport
    106601022 (RAB5C)
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106601022 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   106601022 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   106601022 (RAB5C)
  Exosomal proteins of bladder cancer cells
   106601022 (RAB5C)
GTP-binding proteins [BR:sasa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    106601022 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 106601022
NCBI-ProteinID: XP_014048348
UniProt: B9ENL7
Position
ssa03:complement(60303627..60322209)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGASGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacattgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccagtggccgggccggtggtcgggctgga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (49)   

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