KEGG   Salmo salar (Atlantic salmon): 106607142
Entry
106607142         CDS       T04363                                 
Symbol
RPAB2
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03020  RNA polymerase
sasa03420  Nucleotide excision repair
sasa04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106607142 (RPAB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106607142 (RPAB2)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    106607142 (RPAB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sasa03021]
    106607142 (RPAB2)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106607142 (RPAB2)
Transcription machinery [BR:sasa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106607142 (RPAB2)
  RNA polymerase III system
   RNA polymerase III
     106607142 (RPAB2)
  RNA polymerase I system
   RNA polymerase I
     106607142 (RPAB2)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106607142 (RPAB2)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 106607142
NCBI-ProteinID: XP_014059242
UniProt: B9ENN4
Position
ssa06:33976354..33979219
AA seq 127 aa
MSDNEGDYDDGDFDDAEEDEGLDDLENVEDEDQENVKILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattatgatgatggagactttgatgacgctgaagaggatgag
ggattggatgacctggaaaacgttgaagatgaggaccaagagaatgtgaagatcctgcct
gcaggggaggggtcacaggccaaccagaaaaggatcacaacccaatacatgaccaaatat
gaaagggccagggtgctggggacacgcgccctccagatagcgatgtgtgccccagtcatg
gtggagttggagggagagacagaccctctgcaaattgccatgaaagaactaaagtgcagg
aagatccccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgt
gacgagctcatcatcacagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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