KEGG   Salmo salar (Atlantic salmon): 106613424
Entry
106613424         CDS       T04363                                 
Symbol
chd1l
Name
(RefSeq) chromodomain helicase DNA binding protein 1 like
  KO
K20092  chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106613424 (chd1l)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    106613424 (chd1l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 DEAD LIG3_BRCT SWI2_SNF2 AAA_22 SLFN-g3_helicase Torsin ERCC3_RAD25_C Selenoprotein_S
Other DBs
NCBI-GeneID: 106613424
NCBI-ProteinID: XP_014071088
UniProt: A0A1S3T3B7
Position
ssa10:complement(902152..967192)
AA seq 1085 aa
MASFPQKIKTSIPEETKNSLTEKDLQKWGLQGIQLRAYQLDGVQWLTQCLANQQGCILGD
EMGLGKTCQTISLLLYMRGALRQDGPFLVLSPLSVMDNWRSEMKCLSPCLKVLCYSGDKD
KRAELQRDMNNTHYHVLLTTYELCIKDASFLKRRKWKILVVDEAHRLKNQNSLLHKILME
FSLDFRVLLTGTPIQNNLTELYSLLSFVQPSLFPIDQTEDFTNTYNQVQTQPTLASDLQR
VLQPFLLRRVKAEVAADLPVKTEILMYHGLSALQKRYYKAILMKDLYAFGNEQGNKTRLL
NILMQLRKCVDHPYLFNGVEPEPFEMGEHLIQASGKLCLLDSMLAYLHQGGHHILLFSQM
TRMLDILQDYMEYRGYSYERLDGSVRGEERNLAIKNFSSKDVFVFLLSTKAGGVGMNLTA
ADTVIFIDSDFNPQNDLQAAARCHRIGQTRAVKVIRLLGRDTVEEIVYSRAVSKLRLTNT
VIEEGRFSLLNHTHSAAAAGLQLSEILKFGVDKLLSSEESSIQAVNLGLILGQSRDGEWL
TDEAPTQTKDLPTEEEEEEESEGQNHMYYFEGRDYSREMSSEDQRTFSRLQEEEAGGGGG
GERRATRHNDEVCLSGPLLAPMRKRKALTETDLKEREEAAAKRARLQEDKRRRLQENKHR
KKMAWWESNGYRSLCLPSVESEEEEEEEEEADDLSVTSTDSEHSAISYVLGDVTHPYGNQ
DDAIIVHCVDDSGRWGRGGLFTALENRSDEPRRQYELAGKMKDLKLGSVLLFPVDDKQSR
LDGQDQVALMCLSVCPQVALIVAQHRARDNSLSGIHLSALEEGLQKIYRVAKTNKAGVHL
PRIGHSTRGFNWYGTERLIRKHLASRGVHTSIYYYSRSVSTSALGMSTTPSIASASAPTS
KASAPTSKASAPTSKASASTSKASASTSKASVSLSPSPPHSPPVPQYPGPDSDRESEEGE
TANQSSDRGSEEGETANQSSRTPSPADPALPDFMRGVHVFFYNLTASDRKRLARYLITYE
GDEEEIMSSEVTHIVTELESPVQSQELQELIVQHPHALPVQKTWLEACFSRQRQVNTTKF
LHCFK
NT seq 3258 nt   +upstreamnt  +downstreamnt
atggcgagtttcccacagaaaataaaaacgagcataccggaagaaaccaagaacagtctg
actgaaaaagatttgcagaagtggggtttgcaagggattcagttgcgagcctatcagctg
gacggagtgcagtggctcactcagtgcctggccaaccagcagggatgtatcctaggagat
gagatgggcctgggcaagacctgccagaccatctctctgctattgtacatgagaggggcc
ctgcggcaggacggcccgttcctggtcctcagcccactgtctgtcatggacaactggagg
agcgagatgaaatgcttatccccctgtctcaaggtgctgtgttactctggagacaaagac
aagagagcagagctgcaaagggacatgaacaacacgcactaccatgttttgctaactaca
tatgagctctgtatcaaagatgcctcattcctgaaaaggaggaagtggaaaatcttggta
gttgatgaggctcacagattgaagaaccaaaactccctgttgcacaaaatcctgatggag
ttctctctggatttcagagtgctgctgacaggaactcctatccagaacaacctgacggag
ctttacagcctcctgtcgttcgtccagcccagtctcttccccatagaccagaccgaggac
ttcactaacacttacaaccaggtccagacacaaccgactctagccagtgatctccagaga
gtgctgcagcccttcctgctgaggagggtaaaggctgaggtagcagctgacctccccgtg
aagacagagatcctgatgtaccacggcctgtctgccctgcagaagagatattataaagct
atactcatgaaagacctgtatgccttcgggaatgagcagggcaacaagaccagactgctt
aatatactgatgcagctccggaagtgtgtggaccacccctacctgtttaatggtgtggaa
ccagagccgtttgagatgggagagcatctgatccaggctagtgggaaactctgtctgctg
gacagcatgctggcatacctgcaccaagggggacatcatatcttgctgttttcccagatg
accaggatgctggacattctccaggactacatggaatacagaggttacagctatgagcgt
ctggatggatcagtcaggggggaagagcgtaacctggccattaagaacttcagcagcaaa
gacgtctttgtgtttctactcagcactaaagcaggaggcgttgggatgaacctaacagca
gctgatactgtgatcttcattgactctgacttcaacccccagaatgacctgcaggctgcc
gctcgctgccaccggattggtcagaccagggctgtgaaggtgatccggctcctggggagg
gatacggtagaggagattgtgtactcccgggcggtttctaagctccgccttaccaacaca
gtgatagaagaggggcgtttttctctgctaaaccacacccactctgctgctgctgccggt
ctgcagctcagtgagatcctgaagtttggagtggacaagctgctgtcgtcagaagaaagc
tccattcaggctgtgaacctgggtctgatcctgggtcagtctagagacggggagtggctg
actgatgaagcccccacccagaccaaggacctgcccacagaagaggaagaggaggaggaa
tctgagggacagaaccacatgtactactttgaagggagggactattcccgggagatgagc
tctgaggaccagaggaccttcagtcgtctccaggaggaggaggcaggaggaggaggagga
ggagagagacgggcgacacgacacaacgatgaagtgtgtctgtctgggcccctgttggcc
cccatgaggaagaggaaggccttgactgagactgacctgaaagagagggaggaggctgca
gctaagagggccagattacaggaggacaagaggaggagactacaggagaacaaacacagg
aagaaaatggcatggtgggagtccaatgggtacaggtccctgtgtttaccctctgtggag
agcgaggaggaggaagaggaagaggaggaagctgatgacctcagcgtgacctctacagat
tcagaacactctgctattagttacgtgttgggtgatgtcacacacccttacggcaaccag
gacgacgccatcatagtgcactgtgttgatgactccggccgttggggtagaggtggtctc
ttcacagcgttggagaacaggtcagatgaaccgcgtagacaatacgagctggctggaaag
atgaaagacttgaagctgggatctgtgttgctgttccctgttgatgataaacagtccaga
ctggatggccaagaccaggtggccctgatgtgtctgtctgtctgtccccaggtggccctg
atagtggctcagcacagagccagagacaacagcctgtcagggatccatctctctgctctg
gaagaaggactccagaaaatctacagggtcgccaagactaacaaggccggcgtccacctc
ccccgtatcggccactccaccagagggtttaactggtatggaacagagagactcatcagg
aaacacctggcctccaggggggtacacacctctatatactactacagcaggtctgtctct
acctctgctttaggtatgtccacaacaccctccatagcatcagcctcagccccaacctcc
aaggcctcagccccaacctccaaggcctcagccccaacctccaaggcctcagcctcaacc
tccaaggcctcagcctcaacctccaaggcctccgtctcgttatccccctctcctccacac
tcccccccagtgccacagtatcctggccctgactcagacagggagagtgaggaaggagag
acggccaatcagagctcagacagagggagtgaggaaggagagacagccaatcagagcagc
aggacccccagccccgctgatcctgctctgcctgacttcatgagaggagttcatgtgttc
ttctacaacctgacagcctcagacaggaagagactggcccgctacctcatcacatatgaa
ggagatgaggaggagatcatgagttcagaggtcacacacattgtaacagagttggagagt
cctgtccaatcacaggagctccaggagctgattgttcagcaccctcatgcacttcctgtt
cagaagacctggctggaggcctgcttctctagacagagacaagtcaacaccaccaagttc
ctgcactgctttaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (12)   
   Pfam (12)   
All databases (61)   

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