KEGG T00346: SYN

Syntrophus aciditrophicus: SYN_01037

Entry

SYN_01037 CDS T00346

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sat Syntrophus aciditrophicus

Pathway

sat03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sat03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD HHH_5 T2SE PIF1 AAA_28 DUF258 AAA_29 ArgK UvrD-helicase ABC_tran NTPase_1 AAA_23 PhoH DUF2075 DUF853 AAA_16 TrwB_AAD_bind AAA_10 HHH_2 UvrD_C AAA AAA_22 FtsK_SpoIIIE AAA_17 MobB cobW AAA_18 Arch_ATPase IstB_IS21 MMR_HSR1 DEAD ResIII Mg_chelatase

Other DBs

NCBI-GI:

85859423

NCBI-GeneID:

3884409

UniProt:

Q2LTP5

Position

1628097..1630358

AA seq 753 aa
MVSPLHIPGIFKMEKSPDRTHSSADPLVDLQGHIERVSYINEESGYTVARVKVSGHRDPV
TVVGGMMNPTPGEKVRMKGEWTNHPRFGEQFRLVFCESSVPATAVGIEKYLGSGLIKGIG
PVMARRMVEKFGEATLEIIDQDSARLQEVEGIGEKRITMIRRAWEEQREIRSIMIFLQSH
GVSAAYAARIFRQYGNAAIKVLQENPYRLATDIFGIGFLTADRIAEKMGFARDSHLRAEA
GILYVLHELSEEGHVTYPAGPLIRKCEETLEIDRKFIAAALEGIAGERQIVIEDGASFPE
ALPDRTVSLAKYHLSETQTAARLRILLNTPSALREIETEKAIAWVQEKLSLTLAHNQIEA
IRAAVSNKLLVITGGPGTGKTTIINAIIRIFSASGTKILLAAPTGRAAKRMSEATGMEAK
TIHRLLEYSPQKGGFQKDDTSPLDCEMLIVDEASMIDIILMHHLVKAIPLPSSFIMIGDG
DQLPSVGAGRVLNDVIESGCLPVVELREIFRQARESSIINNAHEINRGKFPRLQPPGDRL
DDFYFVEQEDPEKVVDLIIRLVRERIPQRFGLDPMEDIQVLTPMHRGLAGAGNLNSVLQA
TLNPGKDGLQRGGRFYLVGDKVMQIRNNYDRDVYNGDIGRIVRLDHELQEATLNFDGREV
VYEYGDLEEIVLSYAVSVHKSQGAEYPAVIMPLLMQHYMLLQRNLLYTAVTRGKKLVVII
GSKKALAIAVRNNKTHKRFTLLSQRLRKAMAES

NT seq 2262 nt +upstreamnt +downstreamnt
ttggtgtcgccactccatattcccggaatctttaaaatggaaaaatccccggacagaacg
cattcctcggcagacccgctggttgaccttcaggggcacattgagcgcgtcagttacatc
aatgaagaaagcggttataccgttgcccgggtgaaggtatccggccaccgtgatccggtg
acggtggtgggcggcatgatgaaccccacgcccggggaaaaggtccggatgaagggggaa
tggacgaatcacccccggttcggggaacagttccgtctcgtgttctgcgaatcttccgtt
ccggcaacggccgtcggcatcgagaagtatctgggatcggggctgattaaagggattggc
cccgtcatggcacggcggatggtggagaagttcggcgaggccactctggaaatcatcgat
caggatagtgcccgccttcaggaagtggagggcatcggtgaaaaacggatcaccatgatc
cgcagggcatgggaagaacagcgggaaatccggtccatcatgatttttcttcagtcacat
ggggtcagcgcagcctatgcagcccggatcttccgtcagtacggcaatgccgccataaag
gtgcttcaggaaaacccctatcgccttgccacggatatcttcggaatcgggtttctcacg
gccgaccgaatcgctgaaaagatgggctttgcccgggattcccatctccgtgcggaagcg
ggaatcctctatgtccttcatgaactttccgaggagggccacgtcacttaccctgccggg
ccgctgatccgaaaatgtgaggaaaccctcgaaatcgatcggaaattcatcgctgcggct
ctggaagggattgccggagagcgacagatcgtcattgaagacggagcatctttccccgag
gcactcccggaccggaccgtttccctggcaaaatatcacctttcggaaacgcagaccgca
gccaggctgaggattctgctgaacactccgtcagctctccgtgaaatcgaaacagagaag
gccatcgcctgggtgcaggaaaaattatccctgactctggcgcacaaccagatcgaggcg
attcgtgccgccgtgtcgaataagctgctggtcataaccggcggaccggggacagggaaa
accacgattatcaatgcgatcattcgcattttttccgcatcggggaccaagattctgctg
gctgcgcccacggggagggcggccaaacgaatgagcgaagccacagggatggaggcgaag
acgattcaccggctgctggaatacagccctcagaagggtggattccagaaagacgacaca
tcccccctggactgcgagatgctgatcgtggacgaggcttcgatgatcgacatcatcctg
atgcatcaccttgtaaaggccattcctcttccgtcctctttcatcatgatcggggatggc
gatcaacttccctcagtgggagcgggccgcgttctgaatgacgtgatcgaatcgggttgc
ctgcctgtggtggaattgcgtgaaatcttccgtcaagcgcgggaaagctccattatcaac
aatgcccacgaaatcaaccgggggaaatttccccgcctccagccccccggagaccggttg
gatgacttctattttgtggaacaggaagatccggaaaaagtggtcgatctgattatccgc
ctggtaagggaacgcattccccagcgtttcgggcttgatccaatggaagacattcaggtg
cttactcccatgcatcggggtcttgccggggcggggaatctgaacagcgtcctgcaggcg
acactgaatcccggtaaagacggtctgcagaggggcgggaggttttacctcgtcggagac
aaggtcatgcagatccgcaataattatgaccgcgacgtttacaacggcgatatcggcagg
attgtccggctggaccatgaacttcaggaagccaccctgaactttgacgggcgcgaggtt
gtctatgagtatggcgatttggaggagattgtcctgtcgtatgccgtttctgtccacaaa
tcacagggggcggaatatcccgccgtgatcatgcctctgcttatgcagcattacatgctt
cttcagcggaatctcctctatacggcggttacgcgcgggaaaaaactggttgtgattatt
ggctcaaaaaaggcattggccatcgccgtccgtaacaacaaaacacataagcgtttcaca
ctgctcagccagcgtttgcggaaggcaatggccgaatcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (48)   

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