KEGG T03973: SATRI

Spiroplasma atrichopogonis: SATRI_v1c07680

Entry

SATRI_v1c07680    CDS       T03973

Symbol

rluD

Name

(GenBank) ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

satr Spiroplasma atrichopogonis

Brite

KEGG Orthology (KO) [BR:satr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:satr03009]
    SATRI_v1c07680 (rluD)
Enzymes [BR:satr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     SATRI_v1c07680 (rluD)
Ribosome biogenesis [BR:satr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SATRI_v1c07680 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 ThiS

Other DBs

NCBI-ProteinID:

AKM53220

Position

complement(702388..703305)

AA seq 305 aa
MNNKEIISDQEMRIDKYLQQYFSNSSEPISRTKIQTLINNHQILVNNTIVTNNYQLKIAD
HIQILVPLGEDQPPVIKPQTMELSILYEDEDLMVIDKPNNLVVHPAPGHYEDTLVNGLLA
LDRKWSTIGGSERPGIIHRIDRQTTGLLVVAKNDFAHQHLQEQIQQKTMHRQYLAIVHGI
IAVEKAKITAPIGRDPNDRKKMSVTSKNSKNAITNIVVIQRFKDYTYIKCNLETGRTHQI
RVHLKYINHPVLGDPLYGYTEDKNIPFGQYLHAYQLVLTQPHTGEQLTFTSQLPVEFRDK
LAELA

NT seq 918 nt +upstreamnt +downstreamnt
atgaataacaaagaaattattagtgaccaagaaatgcggattgataagtatttacaacaa
tattttagtaacagttcagagccaatatctcgtaccaaaattcaaacattaattaataac
caccaaattttagttaataacaccattgttacaaataattatcagttaaaaattgctgat
cacattcaaattttagtgccgttaggagaagaccaaccgcctgtaattaaaccccaaaca
atggaactgtcaattctttatgaagatgaggatttaatggttattgataaacccaataat
ttagttgtccatcctgctccgggacattatgaagacactttggtaaatggccttttggca
ttagatcgcaaatggtcaacaattgggggttctgaacgccccggaattatccaccggatt
gatcgccaaacgactggactattggttgtcgcaaaaaatgactttgcccaccaacactta
caagaacaaattcagcaaaaaacaatgcatcgccagtacttagcaattgtgcatggtata
attgcggtggagaaagcgaaaataactgctccaattggccgcgatcccaatgatcgcaag
aaaatgagtgtcactagtaaaaattctaaaaatgcaattacaaatattgttgtaattcaa
agatttaaagattatacttatataaaatgtaatttggaaactggccgaacccatcaaatt
cgggtgcacttaaaatatattaaccatccagttctcggtgatccgttatatggttatact
gaagataaaaacattccgtttggacaatatttgcacgcttaccaattagtcttaactcag
ccccatacgggtgaacagctaacatttacttcccaactccccgtggagtttcgtgataaa
ctagctgagttagcatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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