KEGG   Staphylococcus aureus subsp. aureus ST228/16035 (MRSA): SAI4T8_1006130
Entry
SAI4T8_1006130    CDS       T03146                                 
Symbol
rnr
Name
(GenBank) Ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
sauq  Staphylococcus aureus subsp. aureus ST228/16035 (MRSA)
Pathway
sauq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sauq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAI4T8_1006130 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sauq03019]
    SAI4T8_1006130 (rnr)
   03016 Transfer RNA biogenesis [BR:sauq03016]
    SAI4T8_1006130 (rnr)
Enzymes [BR:sauq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     SAI4T8_1006130 (rnr)
Messenger RNA biogenesis [BR:sauq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SAI4T8_1006130 (rnr)
Transfer RNA biogenesis [BR:sauq03016]
 Prokaryotic type
  tRNA degradation factors
   SAI4T8_1006130 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3 Rho_RNA_bind RNase_II_C_S1
Other DBs
NCBI-ProteinID: CCJ26296
UniProt: A0A7U7EXM3
Position
818324..820696
AA seq 790 aa
MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLVELEQSGLIERTKTDRY
QKKHSSKGHSKLIKGTLSQNKKGFAFLRPEDEDMEDIFIPPTKINRALDGDTVIVEIHQS
KGEHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDDKRIMQDIFIPKGQSLGAVDG
HKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSIIYQHGIEIEFPDEVLQEAEAVP
DHIENTEIKGRHDLRDELTITIDGADAKDLDDAISVKKLANGNTQLTVSIADVSYYVTED
SALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPHVDRLTLSCRMEIDASGRVVKHE
IFDSVIHSDYRMTYDAVNQIITEKDPNIREQYKEITPMLDLAQDLSNRLIQMRKRRGEID
FDISEAKVLVNEVGIPTDVQLRQRGEGERLIESFMLIANETVAEHFSKLNVPFIYRVHEQ
PKSDRLRQFFDFITNFGIMIKGTGEDIHPTTLQKVQEEVEGRPEQMVISTMMLRSMQQAH
YDDVNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELA
EHTSKRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHI
ANMTDDYYRFEERQMALIGERQAKVFRIGDTVKVKVTHVDVDERLIDFQIVGMPLPKNDR
SQRPARGKTIQAKTRGKSLDKSKSDDKGRKKKGKQRKGKNQRNNDKSGNSKHKPFYKDKS
VKKKARRKKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgaatttaaagcaatcaatagaagagattattaatcaacctgaatatgaacctatgtca
gtgtcagattttcaagatgcattaggtttaagtagtgccgactcatttagagatttaatt
aaggtgctcgtagaattagaacaatcaggattaattgaacgtacaaaaacagacagatat
caaaaaaagcatagttcaaaaggtcattcaaaattgataaagggaacgttaagtcaaaat
aaaaaaggctttgcattcttaagacctgaagatgaggatatggaagatatatttattccc
ccaacaaaaattaatcgtgccttagatggagatactgtaattgtagaaatacatcaatct
aaaggtgaacataaaggtaaaattgaaggggaagttaagtcgattgagaagcattcagta
actcaagttgttggtacgtatagtgaagctagacatttcggatttgttattccagatgat
aaacgtattatgcaagatattttcattcctaaaggacaaagtttaggtgcagtagatggg
cataaggtacttgttcaaattactaaatatgctgatggttcagataatccagaaggacat
atttctgctattttaggacataaaaatgatcctggcgtagatattttatctattatctat
caacatggcatagaaattgaatttcctgatgaagtgttacaagaagctgaagcagtacct
gatcatattgaaaatactgaaattaaaggccgtcatgatttacgtgatgaattgacaatc
acaattgatggtgctgatgctaaagacttagatgacgcaattagtgttaaaaagttagcg
aacggtaatacgcagttgactgtaagtattgctgatgtcagttattatgtaactgaagat
tcagctttagataaagaagcttatgatagagcgacaagtgtatatcttgttgaccgtgtg
attccgatgattccacatcgattaagcaatggtatttgttcattaaatcctcatgttgat
cgtttaacgttaagctgtcgcatggaaatcgatgctagtggtcgcgttgttaaacatgaa
atttttgatagtgttatacattctgattatcgaatgacgtatgatgcggtaaatcagatt
attactgaaaaggatcctaacattcgcgaacaatataaagaaattacgcctatgttagat
ttagcacaagatttatctaatcgtttgattcaaatgagaaaacgacgtggtgaaatcgat
tttgatattagtgaagcaaaagtattagttaacgaagtcggtataccaacagatgttcaa
ttaagacaacgtggcgagggtgaacgtctaattgaatcatttatgttaattgcaaatgaa
acagttgctgaacattttagtaagttaaatgtaccttttatttaccgagtgcatgagcaa
cctaaatcagatcgcttaagacaattctttgattttattacaaactttggcatcatgatt
aagggcactggcgaagatattcatccaacaacacttcaaaaggttcaagaagaagtagaa
ggtcgacctgaacaaatggtcatttcaacaatgatgttacgttcaatgcaacaagcgcat
tatgatgatgtgaacttgggacattttggcttatcagctgaatattatacgcattttaca
tcaccaattagacgttatcctgatttaacagttcatcgtttaatccgtaagtatttaatt
gagaaatcaatggataacaaagaagtgaagcgttgggaagacaaattgcctgagttagct
gaacatacttctaaacgtgaacgtcgtgctattgaggcagaacgtgatactgatgaattg
aaaaaagcagaatatatgattcaacatattggtgatgaatttgaaggtattgtcagctca
gtagctaacttcggtatgttcattgaattgccaaatacgatagaaggtatggttcatatt
gcgaatatgactgatgattattaccgttttgaagagcgtcaaatggcattaattggtgag
cgtcaagctaaagtatttagaattggtgacacagttaaggttaaagtgacgcatgttgat
gtagatgaacgattaattgattttcaaattgttggaatgcctttacctaaaaatgaccgc
tcacagcgaccagcaagaggtaaaacgattcaagctaaaacgcgtggcaaatctttagat
aaatcgaaatctgatgataagggtcgtaagaaaaaaggtaagcaacgtaaaggtaaaaac
caacgtaataatgataaatcaggtaatagtaagcataagccattttataaagataaaagt
gtgaaaaagaaagcacgtcgtaagaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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