KEGG   Staphylococcus aureus subsp. aureus SA957 (CA-MRSA): SA957_0676
Entry
SA957_0676        CDS       T02850                                 
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
sauu  Staphylococcus aureus subsp. aureus SA957 (CA-MRSA)
Pathway
sauu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sauu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SA957_0676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sauu03019]
    SA957_0676
   03400 DNA repair and recombination proteins [BR:sauu03400]
    SA957_0676
Enzymes [BR:sauu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SA957_0676
Messenger RNA biogenesis [BR:sauu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SA957_0676
DNA repair and recombination proteins [BR:sauu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SA957_0676
SSDB
Motif
Pfam: DEAD Helicase_C RQC HRDC RecQ_Zn_bind ResIII GH123_cat DUF1033 Adhesin_P1_N
Other DBs
NCBI-ProteinID: AGW33175
Position
763008..764789
AA seq 593 aa
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVI
SPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYF
LNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQ
DIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFVLDYIKTHDEDAGIIYCSTRKQVE
ELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLT
KMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQ
QESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEI
LMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIA
PVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgatgcaacaaacattatcgcattactttgggtatgaaacgtttcgaccaggacaagaa
gaaattattagcaaagtattagaccatcgtaatgtgcttggtgtcttaccaactggtgga
ggtaagtctatatgctatcaagtaccaggtttattgttaggtggtacaacaattgtaata
agtccacttatatcattaatgaaagatcaagtggatcagttaaaagcgatgggaattcag
gctgcttttttaaatagtagtttgactcaaaaagagcaacaacgtattgaaaaagcatta
tcaaatggagaaattcaatttttgtatgttgcaccagaacgatttgaaaaccgatatttt
ttaaacatgcttcagcgtataaagattcacttagtcgcgtttgatgaagcgcattgtata
tctaaatggggacatgatttcagaccgagttatcaaaacgtcatttctaaagtatttacg
ttacctcaagattttacaataatagcgttgacagcaactgccacggttgaagtacagcaa
gatattagagaaaagttaaatatcgctcaaactgatcaaattaaaacgagtactaagcgt
agaaacttaatttttaaagtaaatcctacttaccaacgtcaaaaatttgtattagattat
attaaaacacacgatgaagatgcaggtattatttattgttctacacgtaagcaagttgaa
gagcttcaagaagccttagaaagccagaaaattgaaagtgttatatatcatgcaggtttg
agcaataaagaaagggaagaagcgcaaaatgacttcttatttgatcgtgttaaagtagtc
gttgctacaaatgcttttggtatgggtattgataaatccaatgtacgttttgttattcat
tataatatgcctggagatttagaatcttattatcaagaagcgggtcgtgcaggtcgtgat
gggttgaaaagtgaatgtattttgttatttagtgaacgcgatatcaatttacacgagtat
tttataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaagttaact
aaaatgattcaatatacaaaaacaaaaaaatgtttagaagcaacaattgtccattatttt
gaaccgaatgaaaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaa
tcatataatatgacacaagaagctaagatgattattagttgcatcgctcgtatgaaacaa
caagagagttatagtgttatcattcaagtgctaagaggagagtcaacagattatattaag
tataaaggttatgatcaaatttcaacccatggtttaatgaaaggttacacaacatcagaa
ttaagtcacttaatagatgaattaagattcaaagggttcttaaatgaaaatgatgaaata
ttaatgtgtgatacttcaattaaaaaattactcagtaatgaagtagaagtattcacaaca
ccatttaagcaaaaagcgactgaaaaagtatttataaatacggttgaaggggttgaccga
gtattattcagtcagttggtagaagttcgtaaaaagttaagtgacaaattaacgatagca
cctgtaagtatattttctgattacacgttggaggaatttgctaaacgtaagcctgcttcg
aaacaagatatgattaatattgatggcgtaggtagttacaaattaaaacattattgtcca
gcatttttagaaacgattcaaaattataaagccaaagtatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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