KEGG   Shewanella amazonensis: Sama_0031Help
Entry
Sama_0031         CDS       S.amazonensis                          
Gene name fadA
Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Orthology K00632  acetyl-CoA acyltransferase [EC:2.3.1.16]
Pathway saz00071  Fatty acid metabolism
saz00280  Valine, leucine and isoleucine degradation
saz00281  Geraniol degradation
saz00362  Benzoate degradation via hydroxylation
saz00592  alpha-Linolenic acid metabolism
saz01100  Metabolic pathways
Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:saz00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:saz00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:saz00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:saz00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:saz00281]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: Thiolase_N Thiolase_C ACP_syn_III ketoacyl-synt
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3
Motif
Other DBs NCBI-GI: 119773173
NCBI-GeneID: 4602288
JGI: Sama0031
UniProt: A1S1I7
Position complement(33194..34357) Genome map
AA seq 387 aa AA seqDB search
MKQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQ
TLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEH
MGHVPMNHGVDFHPGLAANVAKASGMMGLTAEMLGKLHGISREMQDQFAVRSHQRAHAAS
IEGRFANEIYAIEGHDANGALIKVDYDEVIRPETTLESLAGLRPVFDPANGTVTAGTSSA
LSDGAAAMLVMEEEKARALGLTIRARVRSMAVAGCDAAIMGYGPVPATQKALARAGLSIQ
DMDVIELNEAFAAQSLPCVKDLGLMDVVEDKVNLNGGAIALGHPLGCSGARISTTLINLM
EHKDATLGLATMCIGLGQGIATVFERV
NT seq 1164 nt NT seq  +upstreamnt  +downstreamnt
atgaaacaagccgttatcgtagattgcatccgcactcccatgggccgttccaagggtggt
gtattccgtaatgttcgcgccgagacactgtctgccgagttgatgaaagccctgttgctg
cgtaaccccggcgttgacccaaacaccattgaagatgtgatttggggctgtgttcagcaa
acgctggagcaaggctttaacatagcccgcaacgcttcactgctggctggagtgcctaaa
actgccggtgctgtgacagttaaccgcctctgtggttcttccatggaagccctgcatcag
gcttcccgtgccatcatgacaggtatgggtgacacctttatcatcggtggtgtcgagcac
atgggtcatgtacctatgaaccacggtgtggacttccaccctggcctcgctgccaatgta
gccaaggcctcaggtatgatgggcctgactgccgaaatgctgggtaagctgcacggtatc
agccgtgaaatgcaggaccagtttgctgtgcgctcacatcagcgcgcccatgctgcatcc
attgaaggccgcttcgctaacgagatatatgccattgaaggccacgatgccaacggcgcc
cttatcaaggtggattacgacgaagttatccgtccggaaactacgcttgaatctctggct
ggtctgcgccctgtattcgatcctgccaatggaaccgtgaccgcaggtacgtcttcagcc
ctgtcggacggcgccgcagccatgttggtgatggaagaagaaaaagcccgcgccttgggt
ctgacgattcgagcccgggttcgctccatggccgtagccggttgtgacgccgctatcatg
ggttatggcccagtgcccgcaacccagaaagcactggctcgtgccggtctcagcattcag
gacatggatgtgattgagctgaacgaagcctttgccgcccaatctctgccatgcgtgaaa
gacttggggctaatggatgtggtggaagacaaggtgaacctcaatggtggtgcaattgca
ttgggtcaccctctgggctgctccggagcccgtatctccaccaccctgatcaacctgatg
gaacacaaggacgccactctgggcctggcaactatgtgtatcggtttgggtcaaggcata
gccactgtgtttgaacgtgtttaa
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