KEGG   Shewanella amazonensis: Sama_0032Help
Entry
Sama_0032         CDS       T00445                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
saz  Shewanella amazonensis
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:saz00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Sama_0032 (fadB)
   01212 Fatty acid metabolism
    Sama_0032 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Sama_0032 (fadB)
   00650 Butanoate metabolism
    Sama_0032 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Sama_0032 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Sama_0032 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Sama_0032 (fadB)
   00310 Lysine degradation
    Sama_0032 (fadB)
   00380 Tryptophan metabolism
    Sama_0032 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Sama_0032 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Sama_0032 (fadB)
   00281 Geraniol degradation
    Sama_0032 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Sama_0032 (fadB)
Enzymes [BR:saz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Sama_0032 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Sama_0032 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Sama_0032 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Sama_0032 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(34377..36527)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELTADKIARLCFNAPGSVNKFDRETLASLNAALDVLKDSDAKAAVLTSGK
DTFIVGADITEFLALFAEEDAKLMEWIAQANVVFNKLEDLPFPTVSAIKGFALGGGCEAI
LATDFRVADTSAKIGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDQRPEDALKV
GAIDAVVAPENLEAAAIQMLNDALAGKLDWQARRARKQAPLTLPKLEAMMSFTTAKGMVY
AVAGKHYPAPMAAVSVVEQAAGMSRAEALVVEHNAFIKLAKTDVATALIGIFLNDQLVKG
KAKKASKLAKDIKHAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGVNEAAKLLS
AQVARGRSTPDKMAKVLNNITPALDYAPLKDVNVVVEAVVENPKVKAMVLADVENVVADD
AIIASNTSTISIDLLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVASVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGGDFAAIDKVMEKQFGWPMGPAYLL
DVVGLDTGHHAQAVMADGFPDRMGKSDKDAIDVMYEAGRLGQKNGKGFYQYSIDKRGKPK
KDVDPASYTMLAEAFGAQKAFEADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYG
LGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELASNNGSYYPKA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacaatccaggtcgaattgaccgctgacaagattgcccggctc
tgtttcaacgctcccggctcggtcaacaagttcgatcgtgaaaccctcgcctctctcaat
gccgcactcgatgttctcaaagactcagatgccaaggccgctgttctgacctctggtaaa
gacacctttatcgttggcgccgacatcaccgagtttttggccctcttcgccgaagaagac
gccaagctgatggagtggattgcccaggccaacgtagtatttaacaaactcgaagacttg
cctttcccaacggtatccgccatcaaaggattcgcactgggcggcggctgtgaagcaatt
ctggccaccgatttccgtgttgccgataccagcgccaagataggcctgccagaaaccaag
ctcggcctcatccccggttttggtggcaccgtgcgcctgccgcgcctgattggtgccgat
aacgcactggagtggatcaccacaggtaaagatcagcgccccgaagatgcccttaaagtg
ggggcaattgatgcggtagtcgcccccgaaaatctggaagcagcagcaattcagatgctc
aacgatgccctcgccggcaagctcgactggcaagcccgccgcgcccgcaaacaggcaccg
ctgacgctgccaaaactcgaagccatgatgtctttcaccaccgccaaaggcatggtgtat
gccgttgccggcaagcactaccctgcgcccatggcggctgtgtcagtggttgagcaagct
gccggtatgagccgcgccgaagctctggtggttgagcacaatgcctttatcaagctggct
aaaaccgatgtagccactgcgcttatcggtattttcctcaacgaccagttggtaaaaggc
aaggcgaaaaaggcctccaaactggccaaggatatcaagcacgccgccgtattgggcgcc
ggtatcatgggtggtggtattgcctaccaaagcgccagcaagggcacacctatcgtcatg
aaagacatcaatcaggccgcactggatttgggtgtgaacgaagccgccaagctgctcagc
gcccaggttgcccgaggccgctcaacgccagacaaaatggcgaaggtactcaataacatc
accccggctctggactatgcgccactaaaagacgtgaacgttgttgtagaagctgtggtg
gaaaatcccaaggttaaagccatggtgcttgccgatgtggaaaatgtggtggccgacgat
gccattatcgcttccaacacttccaccatctccatcgacttactggcgaagagccttaaa
aaccctgcccgtttctgcggtatgcacttctttaacccggtacacaagatgccgctggtt
gaggtaatccgtggtaaagataccagcgaagaaaccgttgcctcagtggtggcttatgcc
agcaagatgggcaaaacccccatagtggtaaacgactgcccgggcttcttcgttaaccgt
gtactcttcccttactttgctggcttcaatggtctgttggccgatggcggcgacttcgca
gccatcgacaaggtaatggaaaagcagtttggctggccaatgggtcctgcctacctgctg
gacgttgttggtctggacaccggccaccacgcccaggccgtaatggcggatggtttccct
gaccgcatgggcaagtcagataaagatgccattgatgtgatgtacgaagccggtcgcctc
ggtcagaagaacggtaagggcttctaccagtacagtatcgataaacgtggcaagccgaag
aaagacgtagacccagcctcttacaccatgcttgccgaagcctttggtgctcagaaagcc
ttcgaggccgatgaaattattgcccgcaccatgatccccatgatcattgaaacggtacgc
tgccttgaagaaggcattgttgccagcccggccgaagccgatatggggctggtgtatggc
cttggcttcccgccattccgcggtggcgtattccgctatctggataccatgggcgtggcc
aactttgtggctctggccgacaaatacgcccatctgggcggcctgtatcaggtgaccgac
gccatgcgcgaacttgccagtaacaatggcagctactatccaaaggcctga

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