KEGG   Shewanella amazonensis: Sama_0117Help
Entry
Sama_0117         CDS       T00445                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
saz  Shewanella amazonensis
Pathway
Base excision repair
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:saz03410]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(131236..132051)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVPELAQNIVGQTILGVRRRAKYLL
IDTQAGTTIVHLGMSGSLRVLPKNTPVEKHDHIDLVMQNGRVLRFNDPRRFGAWLWSELP
EAAHPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDNAIVVGVGNIYANEALFAA
GIHPEAEAGKVDAERLTLLTAEVKTILTQAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR
GGETCTECGHLLSEIRLGQRTTVFCSLCQTK
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccggaagttgaagtgacccgccagggcattgcgccccacctggaaggc
aaccgcgttgaagccctgattgtgcgtaatgccaacctgcgctggccagtgccagaacta
gcacaaaacattgttggccaaaccattttgggtgtcagacgccgggccaagtatttgctg
atagatacacaggcgggcaccactattgtgcatttgggcatgtccggcagcctgagggtg
ctgccaaaaaatacccctgtcgagaaacatgatcacattgatctggtgatgcaaaatggc
cgggtattgcgttttaacgatccccgccgcttcggcgcttggctctggagtgaactgccg
gaagcggcccacccgctgctggaaaagctgggacctgagccgctatcggccgctttccat
gccgattacctgcaagccgcactcaaaggtaagaagaaagccatcaagctgtgcctgatg
gacaacgccatcgtggtgggcgtggggaatatctacgccaatgaagccttgtttgccgcc
ggtattcaccctgaggcagaggcgggcaaagtcgatgccgagcgccttaccctgctcact
gctgaagttaagacgatactgacgcaggctataaaacaaggcggcaccactctcaaggac
tttaccaatgccgacggcaagcccggttactttgctcaaaaattacatgtgtatggccgc
ggcggcgagacctgcaccgagtgcggccacctgctgagtgaaattcgcctgggtcagcgc
actacggtattttgcagcctctgccagacaaaataa

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