KEGG T00445: Sama

Shewanella amazonensis: Sama_0375

Entry

Sama_0375 CDS T00445

Gene name

aceE

Definition

pyruvate dehydrogenase subunit E1

Orthology

K00163

pyruvate dehydrogenase E1 component [EC:1.2.4.1]

Organism

saz Shewanella amazonensis

Pathway

saz00010	Glycolysis / Gluconeogenesis
saz00020	Citrate cycle (TCA cycle)
saz00620	Pyruvate metabolism
saz00650	Butanoate metabolism
saz01100	Metabolic pathways
saz01110	Biosynthesis of secondary metabolites
saz01120	Microbial metabolism in diverse environments

Module

saz_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:saz00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:saz00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:saz00620]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:saz00650]

SSDB

Motif

Pfam:

Transketolase_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

453823..456519

AA seq 898 aa
MSEPMQMLQDLDPIETQEWLAALESVVREEGVERAQFLLEQVLEQARLDGVDMPTGITTN
YVNTIPLTQEPAYPGDITIERRIRSIIRWNAIMIVLRASKKDLELGGHMASFQSAAAFYE
VCFNHFFRAPNHKDGGDLVYYQGHIAPGIYSRAFLEGRLTEEQLDNFRQEVDGKGISSYP
HPKLMPEFWQFPTVSMGLGPISSIYQARFLKYLNGRGLKDTTEQRVYAFLGDGEMDEPES
RGAISFAAREKLDNLCFLINCNLQRLDGPVMGNGKIIQELEGLFKGAGWNVIKVVWGSGW
DKLLAKDTTGKLLQLMNETVDGDYQTFKAKDGAYVREHFFGKYPETAALVADMTDEEIFA
LKRGGHEPSKLYAAFKAAQETKGRPTVILAKTVKGYGMGDAAEGKNIAHQVKKMDMSHVA
KLRDRLGVTDLVSDEDLVNLPYIKLEEGSVEHTYLHARREALHGYTPKRLPNFTGEFVAP
ELSEFKPLLEEQKRDISTTMGFVRTLNILLKDKNIGKNIVPIIADEARTFGMEGLFRQIG
IYNPYGQNYIPEDRDIVSYYKEDTSGQVLQEGINELGAMSSWVAAATSYSTNNLPMIPFY
IYYSMFGFQRVGDMAWMAGDQQARGFLLGATAGRTTLNGEGLQHEDGHSHILAGTVPNCI
SYDPTFAYETAVIIQDGIRRMYGEQENVFYYLTLMNENYAMPAMPEGAEEGIRKGIYKLE
SHTGGKGSAYSPAKPSKVQLMSSGTIMNEVRKAAVILAEEYGIGSDVFSVTSFNELARNG
QDCERFNMLHPEADARVPYITSVLGSEPAIAATDYMKNYAEQVRAFMPSVSYKVLGTDGF
GRSDSRANLRRHFEVNAGYVVVAALNELAKRGDIEKSVVVAAIKKFDIDTEKMNPLYA

NT seq 2697 nt +upstreamnt +downstreamnt
atgtctgaacctatgcaaatgctacaagacttagatcccatcgaaacccaggagtggctg
gcggccctcgagtccgttgttcgcgaagaaggcgtcgaacgtgcccaattcctgctggag
caagtgttggagcaggcccgtcttgatggtgtggacatgccaaccggcatcaccaccaac
tatgtgaacaccatccccttgactcaggaaccggcttaccctggtgatatcaccattgaa
cgccgcatccgttccatcattcgctggaacgccatcatgatagtactgcgcgcctccaag
aaagatctggagctgggtggtcacatggcgtctttccagtcggcggctgctttctacgaa
gtgtgtttcaaccactttttccgcgcccccaaccacaaagatggtggcgacctggtttac
tatcagggccacattgcccccggtatttatagccgtgctttcctcgaaggtcgtctgacc
gaagagcagctggacaacttccgtcaggaagtggacggcaagggtatttcgtcttaccca
caccccaagctgatgcctgaattctggcaattcccaaccgtatccatgggtctgggccct
atctcttctatttatcaggcacgcttcctcaagtacctgaatggccgtggactgaaagac
accaccgagcagcgcgtgtacgccttcctcggcgatggtgaaatggacgagccggaaagc
cgcggtgctatctccttcgctgcccgtgagaagctggacaacctgtgcttcctcatcaac
tgtaacctgcagcgtctcgacggcccggtaatgggtaacggcaaaattatccaggaactc
gaaggcctgtttaaaggcgcgggctggaacgtaatcaaggtagtgtggggcagtggctgg
gacaagctgctggccaaagacaccaccggcaagctgctgcagctgatgaacgaaaccgtt
gacggtgactatcagaccttcaaggccaaagatggtgcctacgtgcgtgagcacttcttc
ggtaagtacccagagacggctgctctggttgccgacatgaccgacgaagaaatcttcgcc
ctaaagcgcggtggccatgagccttccaagctgtacgcggcattcaaagctgcccaggag
accaaggggcgtccaactgtgatcttggccaagactgtaaaaggttacggcatgggcgat
gcggccgaaggcaagaacatcgcgcaccaggtgaaaaagatggacatgtcccacgtggcc
aagctgcgtgaccgtctgggtgtgacggatctggtcagcgacgaagatctggttaatctg
ccatacatcaagctcgaagaaggcagtgttgagcacacctatttgcacgcccgtcgtgaa
gccctgcacggctacacgcccaagcgtctgcctaacttcaccggcgagtttgttgcccct
gaactgtctgagttcaagccgctgctggaagagcagaagcgtgatatttctaccaccatg
ggctttgttcgtaccctgaacatcctgctcaaggacaagaatatcggcaaaaacatcgtg
cctattatcgccgacgaagcccgtaccttcggtatggaaggtctgttccgtcagattggt
atctataacccctacggccagaactacattccggaagaccgcgatatcgtgtcttactac
aaggaagacacttcaggccaggtactgcaagaaggtatcaacgagctgggcgccatgtct
tcatgggttgccgctgccacctcgtacagcaccaacaacctgccaatgatcccgttctac
atctactactccatgttcggcttccagcgtgtgggcgatatggcgtggatggcaggcgac
cagcaggcgcgcggcttccttttgggtgccactgccggtcgtaccaccttgaacggtgaa
ggtctgcagcacgaagacggtcacagccacatcctggccggtaccgtacctaactgtatt
tcttacgatccgacctttgcttacgaaactgccgtgatcattcaggacggtatccgccgc
atgtatggcgagcaggagaacgtgttctactacctgaccctgatgaacgaaaactacgcc
atgccagccatgccagaaggtgccgaggaaggtatccgcaagggtatctacaaactcgaa
agccatacaggtggcaagggcagtgcctacagcccagcgaagccatcaaaagtgcagttg
atgagctcaggcaccatcatgaatgaagtacgtaaagccgcggttatcctggctgaagaa
tacggcataggttcagatgtgttctccgtgacttcgttcaacgagctggcccgtaacggt
caggactgcgagcgtttcaatatgctgcatcctgaagctgacgcccgcgtaccttacatc
acctcagtactgggcagcgagcctgccattgccgcgaccgactacatgaagaactacgcc
gaacaggttcgtgccttcatgccaagcgtgtcctacaaggtgctgggtaccgacggtttc
ggtcgctctgacagccgcgccaacctgcgtcgtcacttcgaagtgaacgccggttacgtg
gtggttgcagccctgaacgagctggccaagcgcggtgacatcgagaaatctgtggtggtt
gctgccatcaagaagttcgatatcgacaccgagaagatgaacccactttacgcgtaa

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SAZ (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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