KEGG T00445: Sama

Shewanella amazonensis: Sama_0376

Entry

Sama_0376 CDS T00445

Gene name

aceF

Definition

dihydrolipoamide acetyltransferase

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

saz Shewanella amazonensis

Pathway

saz00010	Glycolysis / Gluconeogenesis
saz00020	Citrate cycle (TCA cycle)
saz00620	Pyruvate metabolism
saz01100	Metabolic pathways
saz01110	Biosynthesis of secondary metabolites
saz01120	Microbial metabolism in diverse environments

Module

saz_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:saz00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:saz00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:saz00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 RnfC_N HlyD GCV_H NQRA Ribosomal_60s

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

456531..458459

AA seq 642 aa
MAIEIHVPDIGTDEVEVTEILVKVGDSITEDQSLITVEGDKSSMEVPAPKAGVVKEIKIA
VGDKVATGSLIMMFEGEQAAAAPAAQAAAPVPVAAAPAATAVAALKDVFVPDIGGDEVEV
TEILVKVGDSITDEQPLITVEGDKASMEVPAPFAGVLKEIKVATGDKVATGSLIMVFETQ
AASAAPVAAAAPVAAAAAPAPVAAAPVAGGDKDIHVPDIGGDEVEVTEVLVKVGDTVAAD
QSLLTVEGDKASMEVPAPVAGVVKAIKVAAGDKVSTGSLIMVFEVQGAAPAAAPAAPVAP
AAPQAAAPAANAQAQAPSQGQSKTGEFVENHEYAHASPVIRRLAREFGVNLAKVKGTGRK
GRVVREDVQSYIKEALKRLESGSATAAAGAASGAGLNLLPWPKVDFSKFGEVETQPLSRI
KKISGANLHRNWVMIPHVTQFDEADITELEDFRKAQNAEEAKRDTGMKITPLVFIMKAVA
KSLEAFPSFNASLSEDGESLILKKYINIGIAVDTPNGLVVPVVRDVNKKGIYELSRELAD
ISKKARAGKLTASDMQGGCFTISSLGGLGGTSFTPIVNAPEVGILGVSKSELKPKWNGKE
FVPRLMLPLSLSYDHRVIDGAEGAKFTTYLSGVLSDIRKLVL

NT seq 1929 nt +upstreamnt +downstreamnt
atggcaatcgaaattcatgtacccgatatcggcactgatgaagtcgaagtgaccgagatc
ctggtcaaggtgggtgattccatcactgaggatcagtcgctgatcaccgtggaaggcgac
aagtcttccatggaagtaccggctcccaaggctggtgtggtcaaggaaatcaaaattgcg
gtgggcgacaaggtcgccaccggctcactgatcatgatgtttgaaggtgagcaagcagct
gctgctccggcggcccaggccgctgcgccagtgccggttgctgcagccccagctgctaca
gcggtagccgcgctgaaagacgtattcgtgcctgacatcggcggtgacgaagttgaagtc
actgaaattctggtgaaagtaggcgacagcatcactgatgagcagccactgatcacagta
gaaggcgacaaggcttctatggaagtgcctgcgccgttcgccggtgtgctcaaagaaatc
aaggtcgccaccggtgataaggtagccactggctcccttatcatggtgttcgagactcag
gctgcatccgctgctcctgtggccgcagctgctcctgtggccgcagctgctgcgccagcg
ccggttgccgccgcgccagttgccggcggtgacaaagacattcacgtgccggacatcggc
ggcgatgaagtggaagtgaccgaagtgctggtgaaggtaggcgacacagttgccgccgac
cagtcgctgctgacagtggaaggcgacaaagcctctatggaagtacctgcgccggttgcc
ggtgtggttaaggccatcaaggtggctgccggtgacaaggtgtctaccggttcactgatc
atggtgttcgaagtacaaggtgctgctcctgctgccgcgccagctgcacctgtggctccg
gccgctcctcaagctgcggctccggctgccaatgcccaggcccaggctccgtctcagggg
caaagtaagactggtgagttcgtggaaaaccacgagtacgcccacgcgtcaccggttatc
cgtcgtctggcccgtgagtttggcgttaaccttgccaaggtcaagggtacaggtcgtaag
ggccgagtggtacgtgaagacgtgcagtcttacatcaaagaagcactcaagcgcctcgag
tcaggctctgctaccgccgccgcgggcgctgcctccggcgctggcctgaacctgctgcca
tggccgaaggttgacttcagcaaatttggtgaagttgagactcagccgttgtcacgcatc
aagaagatcagtggtgccaacctgcaccgtaactgggtgatgatcccccatgtgactcag
tttgatgaggccgacatcaccgagcttgaggacttccgcaaggcgcaaaacgccgaagaa
gccaagcgcgataccggtatgaagatcaccccgctggtgttcatcatgaaggcggtggcc
aagtcgctggaagccttcccatcattcaacgcgtctctgtctgaagatggcgagagcctt
attctgaagaagtacatcaacatcggcattgcggtggatacccccaatggtctggtggtg
cctgtggtacgtgatgtgaacaagaaaggcatctatgagctgtcccgcgagctggctgac
atctccaagaaggcccgcgccggtaagcttactgcctctgacatgcagggcggctgcttt
accatctccagcctcggtggcctcggtggtacctcgttcaccccaatcgtgaatgcccct
gaagtgggtattctgggtgtgtccaagtctgagctcaagcccaagtggaacggcaaggaa
tttgtgcctcgcctgatgttgccactgtcgctgtcgtacgaccaccgggtgatcgacggc
gccgaaggtgccaagttcaccacgtatctgagcggtgtactgtcagacatacgcaaactc
gttctgtaa

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SAZ (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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