KEGG   Shewanella amazonensis: Sama_2134Help
Entry
Sama_2134         CDS       T00445                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
saz  Shewanella amazonensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:saz00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Sama_2134 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Sama_2134 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Sama_2134 (trpA)
Enzymes [BR:saz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Sama_2134 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2579988..2580788
Genome map
AA seq 266 aa AA seqDB search
MNRYSNAFARLKAGSRGAFVPFVTLGDPGIDESLAIIDALVEGGADCLELGFPFSDPLAD
GPVIQGANIRALAAGTTPDTCFKMIEQIRAKYPELPIGLLLYANLVFANGIEAFYQRAKA
AGVDSVLIADVPAEESAPFVAAARAEGIAPIFIAPPNASADTLRLVASLGEGYTYLLSRA
GVTGADNKAGMPLDSVLSALKEFNAPPPLLGFGIAEPSQVQEAIAAGAAGAISGSAVVKR
IEALKDDMPKLLTELKSFASAMKAAT
NT seq 801 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgatattcgaacgcctttgcccgcttaaaagccggatcacggggcgccttcgtg
cctttcgtcaccctgggtgacccaggcatcgacgagagtctcgcgattattgatgccctg
gttgaaggcggcgccgattgtcttgagctgggctttcccttctcagacccactcgccgat
ggcccggtgatccagggcgccaatatccgcgccttggccgccggaacaaccccggatacc
tgtttcaagatgattgagcaaatccgcgccaagtatcccgaactgcccattggcctcttg
ctgtacgccaatttggtatttgccaatggcatagaagccttctaccaacgcgccaaggct
gccggggtcgattctgtgctgattgccgatgtgccggcagaagagtcagcgcctttcgtt
gccgccgccagggccgaaggcatagcgccgatttttatcgcgcccccaaatgccagcgcc
gacaccctgcgactggtcgcgtcccttggggaaggttacacctacctcttgtcccgcgcc
ggagtgacaggcgccgacaacaaagccggtatgccactggactcggtactatcggccctg
aaggaattcaacgcgcctccaccgctgctgggatttggcattgccgaaccttcacaggtt
caggaagcgattgctgccggggcagccggtgccatttccggctccgcggtagtcaagcgt
atcgaagccttaaaggacgatatgcccaagctcctgactgaactcaagtcctttgccagc
gccatgaaggcagccacctga

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