KEGG T00445: Sama

Shewanella amazonensis: Sama_2965

Entry

Sama_2965         CDS       T00445

Name

(GenBank) SAM-dependent methyltransferase

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

saz Shewanella amazonensis

Brite

KEGG Orthology (KO) [BR:saz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:saz03009]
    Sama_2965
Enzymes [BR:saz01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     Sama_2965
Ribosome biogenesis [BR:saz03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Sama_2965

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 MTS PrmA Methyltransf_25 Methyltransf_15 TRM Met_10 Methyltransf_11 Methyltransf_12 PUA

Other DBs

NCBI-ProteinID:

ABM01168

UniProt:

A1S9W1

Position

complement(3529208..3530398)

AA seq 396 aa
MSIRIKLKPGREKSLDRRHPWVFSSGVHNIKGKPLRGETVDVVAHDGRWLGRGAWSDASQ
IQVRVWTFDKEEAIDRDFFARRIARAQAGREALIREKGLTGYRLVGAESDGLPGITIDRY
ANVLVCQLLSAGADYWRETLVSVLAEQFPECAIYERSDVDSRKKEGLPLVTGLLHGELPA
MPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAGRFVEGKSVLNCFCYTGTFGLYAAK
AGAASIENVDVSTLALDTARHNMAINGLNDDHVTYSEADVFKLLRQYRDEGKTFDVIVLD
PPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLMPADLFQKIVADAALDA
GRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARVW

NT seq 1191 nt +upstreamnt +downstreamnt
atgagcattcgcatcaaactcaagccgggacgggaaaagtccctcgaccgtcgtcacccc
tgggtgttctccagtggcgtacacaacatcaagggcaagcccctgcgcggtgaaaccgtg
gatgtagtggcccacgatggccgctggcttggccgcggtgcctggtcagatgcctcacag
attcaggtgcgtgtctggaccttcgataaagaagaggccatcgatcgtgactttttcgcc
cgccgtatcgcccgtgcccaggctggccgcgaggcgcttatccgcgaaaagggcctcacc
ggctatcgtctggtgggcgccgagtctgacggcctgcccggtatcaccatcgaccgctac
gccaatgtgctggtgtgtcagttgctgtctgccggtgctgattattggcgcgagaccctg
gtatcagtactcgccgagcagttcccggagtgtgccatttacgagcgctctgacgtggac
tcacgtaagaaagaaggcctgccactggtgacgggtttgctccacggagagctgcctgcc
atgccgctgattattgaagaaaacggcatcaagattgccgtcgatgtggaaaagggccac
aagaccggcttttatctcgaccagcgcgacaaccgcgccatggctgggcgctttgtggaa
ggcaagtcggtactcaactgtttctgttacacaggcaccttcggcctctacgccgccaag
gccggagccgccagtatcgaaaacgtggacgtatccaccctggcgctggatactgcccgt
cacaacatggccatcaatggccttaacgacgaccatgtgacttacagcgaagccgatgta
ttcaagctgttgcgccagtaccgcgacgaaggcaaaaccttcgatgtgatagtgctcgac
ccgcccaagtttgccgataacaaggcccagctcaatggcgcctgccgtggctacaaggac
atcaacatgattgccatgcagctattgaagcccggcggcaccctgctgaccttctcctgc
tccggcctgatgcccgccgacctgttccagaaaattgtcgccgatgccgcactggatgca
ggccgcgacgcccagtttatcgagcgcctgagccaggcctcggaccaccccatcggcgcc
gccttcccggaaggtttctacctcaaggggctcgttgcccgggtttggtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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