KEGG S.amazonensis: Sama

Shewanella amazonensis: Sama_3270

Entry

Sama_3270 CDS S.amazonensis

Definition catalase (EC:1.11.1.6)

Orthology K03782 catalase/peroxidase [EC:1.11.1.6]

Pathway saz00380 Tryptophan metabolism
saz00680 Methane metabolism
saz01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:saz00680]
Metabolism; Amino Acid Metabolism; Tryptophan metabolism
[PATH:saz00380]

SSDB

Motif Pfam: peroxidase
PROSITE: PEROXIDASE_2 PEROXIDASE_4

Other DBs NCBI-GI: 119776402
NCBI-GeneID: 4605517
JGI: Sama3270
UniProt: A1SAR6

Position 3884878..3887034

AA seq 718 aa
MSNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVE
ALKQDLKALMTDSQAWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNS
WPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYESMGLKTFGFAFGREDIWHPE
KDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDM
RVTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGI
GRNTVTSGIEGAWTTHPTRWDNGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVE
DPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADTFARAWFKLTHRDMGPKSRYF
GPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGG
ANGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAG
FNIKVPFIPGRGDASQAQTDIDSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLS
APEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVNLTDMSYRWKPVANNLYEICD
RASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA

NT seq 2157 nt +upstreamnt +downstreamnt
atgagtaatgaaggcaaatgtccggtaatgcacggcggtgcaacctctgccacccaggcc
gacaatcattggtggcccaaagccctgaacctcgacatactccaccagcacgacagtaaa
accaaccccatggcaccgggctttaattaccgggaagccctgaaaggcctcgatgtggag
gcactcaaacaagatctcaaagccctgatgaccgacagccaggcctggtggccagcggac
tggggccattatggcggcctgatgatccgcatggcgtggcactcggccggcacctatcgc
attgccgacggtcgtggtggtggcggccatggtgcacagcgctttgccccactcaattcc
tggcccgacaatggcaatctcgacaaggccaggcgcctgctgtggcccatcaaacagaaa
tacggcaacaaagtgagctgggccgacttgatgattttggcaggcaacatggcgtatgaa
tccatggggctgaaaaccttcggctttgcctttggtcgtgaagacatctggcaccccgag
aaagacacctactggggcgcagaaaaagaatggttggcccccagcggcggcgccaacagt
cgctattccggggttcgcgatctgcaaaacccactggcagcagtgatgatggggctgatt
tatgtcaacccggaaggggtcgatggcaatccagacccactgaaaaccgcccaggatatg
cgcgtgaccttcgcccgaatggcgatgaatgacgaagaaactgtggcactcaccgccggt
ggccataccgtgggtaaagcccatggtaatggtaacgccgccaatctggggcctgaacct
gaagccgcgcctttggaagagcaaggctttggctggatgaatcatcaaagtcgcggcata
ggccgcaacacagtcaccagcggaatcgaaggcgcctggaccacccaccccacccgttgg
gacaacggttatttccatctgctgttcagctacgactgggcactcaccaagagtccggca
ggcgcgtggcagtgggagccggtgaacatcagggaagaagacaagccagtggatgtggaa
gaccccaacatccgcagcaaccccatgatgacagacgccgacatggcgctgaagatggac
ccggattaccgccgcatcgccgaaagattcttccacgatcccgactattttgccgacacc
tttgccagggcctggttcaagttgactcacagagacatgggccccaaatcccgctacttt
ggtccggatgtgccagcagaagacttgatttggcaggacccggtacccaagggtaacagt
caatatgaccccgaggcggttaaggcacgcatcgccggtacggggcttggcgccgccgag
ctggtcgccaccgcatgggacagcgccagaacctatagaaactcagataagcgcggcgga
gccaacggcgcacgcatccgcttgttgccgcaaaaagactgggtagccaacgagcccgcc
agactggccagagtgctggagctgcttacccccatcgccagcgacatgggcgtcagcatt
gccgacaccctggtgctgggtggcaatcttggtgtcgagctggcggccaaagccgccggt
ttcaatatcaaggtgccttttatccccggtcgtggtgatgccagtcaggcacaaaccgac
atcgactcctttgaggtgcttgagccactggccgatggcttccgtaactggcaaaagcag
gactttgtggtcacgccggaagaaatgctgctcgaccgggcacaactcatgggactctca
gcgccggaaatgacagtgctgattggtggcatgcgcgccatggcggttaaccatggtgga
accacacatggggtgctgaccgacaatcccggcagcctcagtaatgactttttcgttaac
ctcaccgatatgagttatcgctggaaaccggtcgccaacaatctctatgagatctgcgat
agggcaagtggccagaaaaaatggaccgccacccgggtcgatttggtgtttggctccaac
tctgtattgcgcgcctacgccgagtactatgcccaggacgacaacaaagagaccttcgta
aaggactttgtcaccgcctggtgcaaggtgatgaatgccgaccgcttcgatgcctag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SAZ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (1)   
   PROSITE (2)   
All databases (17)

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