KEGG T02139: Sulba

Sulfurospirillum barnesii: Sulba_1882

Entry

Sulba_1882 CDS T02139

Definition

ATP dependent DNA ligase-like protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sba Sulfurospirillum barnesii

Pathway

sba03410	Base excision repair
sba03420	Nucleotide excision repair
sba03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sba03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sba03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sba03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

390941000

NCBI-GeneID:

13060322

UniProt:

I3XYY8

Position

complement(1856939..1857754)

AA seq 271 aa
MKFFWLCLTFLCLLWADKPSLLLLESYKDQTISGWLMSEKMDGVRAYWDGEKLLSRGGTL
FATPSWFTKGFPYFAVDGELWSKRGDFEHIQSIVMQKEAHEGWRELAFYAFDVPKEVGGL
TKRLSKLDYYLKSDYVDYLKIAPQFTCKDANDLKRFLSEVEKAGGEGVVIRHPDGLYAEG
RDAYSLKVKTFHDAECTVLAHHKGEGKYKSVLGALTCKNDEGAMFKIGSGFSDEQRHNPP
AIGTKITYKYKELTKNGKPRFPVFLRMKEEL

NT seq 816 nt +upstreamnt +downstreamnt
atgaaatttttttggctttgcttgacgtttttatgtttgctgtgggcagataagccttcc
cttttactgcttgagagctacaaagaccaaactatctcagggtggctgatgagtgaaaag
atggatggggtgagagcttactgggatggtgagaagctcctctcaagaggtggaaccctc
tttgccacaccttcatggtttaccaaaggctttccttattttgcggtggatggagagttg
tggagtaagcggggtgattttgagcatattcagtccattgtgatgcaaaaagaggcacat
gaaggatggagggaacttgctttttatgcctttgatgttcccaaagaagtgggagggtta
accaagcgcttatcaaagttagattattatttaaaatcagattatgtggattatttaaaa
attgctccgcagtttacatgtaaagatgcaaatgatcttaaacgctttttgagcgaagtt
gaaaaagcaggaggtgagggcgtggtgattcgccatcctgatggcttgtatgctgaggga
agagatgcgtattcgctgaaagttaaaacctttcacgatgcagaatgtactgtgcttgct
caccacaaaggtgagggtaaatacaaaagcgttttaggtgcgcttacatgtaaaaacgat
gaaggagcaatgtttaaaatcggttctggttttagtgatgaacaaaggcacaatccacct
gccattggaacaaaaatcacttataaatataaagaattaacgaaaaatggaaaacctcgt
tttccagtatttttgcgcatgaaagaagaattataa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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