KEGG   Shewanella baltica BA175: Sbal175_1229
Entry
Sbal175_1229      CDS       T02014                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
sbb  Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:sbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbb03016]
    Sbal175_1229
Enzymes [BR:sbb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Sbal175_1229
Transfer RNA biogenesis [BR:sbb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Sbal175_1229
 Prokaryotic type
    Sbal175_1229
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AEG10506
UniProt: G0APV5
Position
1471119..1472252
AA seq 377 aa
MSELHYLYGKPLGTADLRTQNSDFIVKEILPFSPTGEGEHHMLHVRKEGLNTVQVAEMIA
KFAKVHPKEVTYAGQKDKNAITEQWFGVRIPGKETPLWKDLNSERLTILSSSRHSKKLRI
GALVGNRFILTLRNVTQVEDIISRIEKVAQVGVPNYFGEQRFGHDGKNLVFGRQMMAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLIVLK
RLIEKDIQLSAPLWGRGMMLPQGEAAAVETLAMSELADDCYGLEHAGLEQERRPLLLEPQ
ALKYEQTADGLVLEFVLPAGSFATSLLRELVNYQDVKEQQWQATLVQEPAPEATNVNVAA
NTIETKTEAAPNIEAES
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgagcgaattacattatctgtatggcaagcctttaggtacagcagatttgagaacccaa
aatagcgattttatcgtgaaagagattttaccttttagcccaacgggtgaaggtgaacat
cacatgctgcatgtacgcaaagaagggctaaatacagtacaagtcgctgaaatgatcgct
aagttcgctaaggtgcatccgaaggaagtgacctacgctgggcagaaagataaaaatgcc
atcacagaacaatggttcggtgtgcgtattccgggtaaagagacaccgctttggaaagat
ctcaatagcgaacgtttgaccatattgtcgagcagccgccacagcaaaaaactacgaatc
ggtgccttagtcggtaaccgttttattcttaccctgagaaatgtcacccaagtcgaagac
attatcagccgtatcgaaaaggtcgctcaagtgggtgttcccaattactttggtgagcaa
cgctttggtcacgatggcaaaaacttagtttttggtcgccaaatgatggcgggtaaaaaa
gtcaaagacagaaataagcgcagcatgtatttgtctgcggtgcgctcaaatctgtttaac
actgtagtgtcgtatcgtttagccaaccatggcactaagcctcttgcgggtgattgtgtg
atgttggcgggcagcaaaagcttcttcgttacgcctgaatgggatctcatcgtattgaaa
cgtctgattgaaaaagacattcaactatcagcaccattatggggccgcggcatgatgctg
cctcaaggtgaagctgctgcggtggaaaccttggccatgagtgagttggctgacgattgc
tatggccttgaacatgcgggattagaacaagagcgtcgtccgttactgcttgagccccaa
gcccttaaatacgaacaaaccgccgatggtctcgtgctggagtttgtgttgcctgcgggc
agttttgccacatccttgttgagagagttagtcaattatcaagatgttaaagagcagcaa
tggcaagcgacactggtgcaggagcctgcgccagaggcaacgaatgttaacgtagcggct
aatacaattgaaactaagactgaagctgcgcctaacattgaagcagagtcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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