KEGG T02014: Sbal175

Shewanella baltica BA175: Sbal175_2501

Entry

Sbal175_2501 CDS T02014

Definition

DNA ligase (ATP) (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sbb Shewanella baltica BA175

Pathway

sbb03410	Base excision repair
sbb03420	Nucleotide excision repair
sbb03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sbb03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sbb03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sbb03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2960696..2961625)

AA seq 309 aa
MTHTSPLQDLTFHRFIRFRFFKQRLLLLSLLIFGCLAPVTYAQNSPPSIQLATEFDAQQE
IHIQDFLISEKLDGVRGYWNGQALLTRQGNLIAVPTWFIANFPNYPLDGELWLGRGQFEA
MSSIVRQTSAKDDDWRKVRFMVFDVPKAGGDFQHRYQFALAELSDKSHYLEVIAQFQVDS
LEALYQKLDSLVAKGAEGLMLHRSSATYVSGRNPNLMKLKPYYDAEATVIGHIPGKGQFA
GQMGAIRVQTPDGRIFNIGTGFNLAERQHPPAVGAIITYKYLGLTVNGLPRFASFLRVRV
DIDKIDSQQ

NT seq 930 nt +upstreamnt +downstreamnt
atgactcataccagcccgttacaagatttaacatttcatcggtttatccgctttcgtttt
ttcaaacaacgcctgctcttactcagtctgctgatattcggttgtttagccccagtgacc
tatgcgcaaaactctccaccttcgatacagttggcaactgagtttgatgcccagcaagag
attcatattcaggactttttgattagcgaaaaactcgacggggtgcgaggttactggaat
ggtcaggcactattgacccggcaaggtaatcttattgctgttccgacatggtttatcgcg
aatttcccgaattatcccctcgatggtgagttatggcttgggcgaggccagtttgaggct
atgtcgagcatagttcgacaaacctcagccaaggatgatgattggcgcaaagtgcgattt
atggtgttcgatgttcccaaggcgggtggcgactttcagcatcgctatcaatttgcgttg
gccgaattaagcgataaatcgcattatcttgaagttatagcgcagttccaagtggacagt
cttgaagctctgtatcaaaaacttgatagcttagttgctaaaggcgctgaaggattaatg
ctgcatcgcagctcagcgacgtatgtcagtggccgcaatcctaatttgatgaaattaaaa
ccctattatgatgctgaagcgacagtgatcggccatataccagggaaaggtcaatttgca
gggcaaatgggtgcaataagagtgcaaaccccagacggccggattttcaacataggcaca
ggttttaatctcgcagagcgccaacatccccccgcagtgggcgcaatcatcacctataaa
tatctgggtcttaccgtaaatggcttacccagatttgccagtttcctgcgagtacgcgtc
gatatagataagatcgacagtcaacaatag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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