KEGG   Shewanella baltica BA175: Sbal175_4252Help
Entry
Sbal175_4252      CDS       T02014                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sbb  Shewanella baltica BA175
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sbb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sbal175_4252
Enzymes [BR:sbb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sbal175_4252
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sbal175_4252
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
4995123..4995938
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVPDIAKQIIGQDIRQVRRRAKYLL
IDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCELP
EEAHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVVGVGNIYANEALFAA
GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR
GGETCTSCGNLLSEIRLGQRTTVFCGICQTR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccagaagttgaagtcacccgtcagggtattgcacccttccttgtcgag
caaaccgtggttgatcttgtgatccgcaatggttcgctgcgctggccagtgcctgacatc
gccaaacaaattatcggccaagacatacgccaagtgcgacgccgtgctaaatatctttta
atcgacactgatgcgggcacgagcatagtgcatttaggcatgtcggggagtttacggatt
ttgccccacgataccccagtggaaaagcatgaccatatcgacttagtgctcgccaatggc
cgcattttacgttttaacgatccgagacgattcggtgcttggctatggtgtgaactccca
gaagaagcgcatccattactcgccaaactggggccagagccactgactcaagcctttaat
gtcgcacaattagcggcagctttagcgggcaagaaaaaggccatcaaactctgcctgatg
gataatcatatcgtggtgggtgtgggtaatatttacgccaatgaagccctgtttgcggcg
ggcattcatccagaagccgaagcaggtaaaatcgatatcgagcgcttgaccgttttagtt
gccgaagtgaagcaaatcttagcccacgccattaagcaaggcggcactacgttgaaagac
tttaccaatgccgatggcaagccgggctacttcgcccaaaaactgcatgtctacggtcgc
ggcggtgaaacctgcaccagctgcggtaacttattaagtgaaatccgtttaggtcaacgc
accacagtattctgtggcatttgccagacacgctaa

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