KEGG   Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E2555
Entry
SbBS512_E2555     CDS       T00700                                 
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
sbc  Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SbBS512_E2555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbc03019]
    SbBS512_E2555
Messenger RNA biogenesis [BR:sbc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SbBS512_E2555
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase P-loop_SecA
Other DBs
NCBI-ProteinID: ACD10141
UniProt: B2TVD3
Position
complement(2357352..2358716)
AA seq 454 aa
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSSDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA
SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgccgttgccgagcagggt
taccgtgaacccacccctattcagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggctagcgcccagaccggtaccggtaaaacagcgggctttacgctgccgctgttg
caacacctgatcactcgccagccgcacgccaaagggcgtcgtccggtacgtgcgctcatt
cttaccccgacccgtgaactggctgcgcagattggcgaaaacgtccgtgattacagcaaa
tatttgaacattcgttcgctggtggtgtttggcggtgtcagcattaacccgcaaatgatg
aagctgcgcggcggcgttgatgttctggtggcaacaccgggacgtttgctggacctggaa
catcaaaatgcagtgaagctggatcaggttgaaatcctcgtcctcgatgaagctgaccgc
atgctcgacatgggctttatccacgatatccgtcgcgtgttaacaaaactgccagcgaaa
cgccagaacctgctgttctctgcgaccttctctgacgatattaaagccctggcggaaaaa
ctgttgcacaacccgctggaaatcgaagtggcacgccgcaataccgcgtctgatcaggtg
acccagcacgttcactttgtcgataagaaacgcaaacgcgaattgctgtcgcacatgatt
ggtaaagggaactggcagcaggtgctggtgtttacccgtaccaaacacggcgctaaccat
ctggctgagcagctcaataaagatggcatccgtagtgcggcgatccacgggaataaatcg
caaggtgcgcgtacccgtgcgctggctgattttaaatcgagtgacattcgcgtactggtg
gcgaccgatatcgctgcgcgcggtctggatatcgaagagttgccgcacgtcgtcaactat
gaactgccaaacgtaccggaagattatgtccaccgtatcgggcgtaccggtcgtgcggct
gctaccggtgaagcgttgtcgctggtgtgtgttgatgaacacaaactgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgcgattccgggctatgagccggacccg
tcaatcaaagccgaaccgatccagaacggtcgccagcaacgtggcggcggcggtcgtggg
caaggtggtggtcgcggtcaacagcaaccacgccgtggggaaggtggcgcaaaatctgca
agcgcgaaacctgcagaaaaaccgtctcgccgcctcggcgatgccaaaccggcaggcgaa
caacaacgtcgccgccgtccgcgtaaacctgccgctgcgcagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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