KEGG   Sphingobium baderi: ATN00_20720
Entry
ATN00_20720       CDS       T04194                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sbd  Sphingobium baderi
Pathway
sbd03420  Nucleotide excision repair
sbd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATN00_20720
   03430 Mismatch repair
    ATN00_20720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbd03400]
    ATN00_20720
Enzymes [BR:sbd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ATN00_20720
DNA repair and recombination proteins [BR:sbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATN00_20720
   MMR (mismatch excision repair)
    Other MMR factors
     ATN00_20720
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_22 AAA_30
Other DBs
NCBI-ProteinID: ALR22919
UniProt: A0A0S3F5N1
Position
pDE1:complement(122635..124407)
AA seq 590 aa
MADEETAADAAGRLALERVYACFDAGQSFRLEAGAGAGKTYSLEKALRRLIELRGTELVR
KRQQIGCITFTNVAKDEIIARVQAHPAVRPETIHGFCWSVLQDFQPQLRAIVPDLPGWGE
RLADAGVGGLGARKVNYDLGYPRVTPDEVSLKHEDVLTLMTELLARPKFRLVLAKRYPVL
LIDEYQDTDAGFVEALKQHFLGTGTGPIIGLFGDHWQKIYGEGCGAVEHAALEVIDKNAN
FRSAEPIVAVLNRMRPDLEQIPSDPDAPGEARIFHTNAWPGQRRTGQGGGHWTGDTSPEA
ARAYLDHLKQRLSDEGWDFAVERTKILMLSHSVLAKEQGYPTIQSIYGQFNDAWLKKEDP
HIKFLADQLEPACAAFQAKRYGEMFESLGAGRPCIRRHHDKVAWTQSLEQLIQLRATGTI
GAVIDLIKGQAHMHLPEAVLDREQRLADAGPEPVEGESRRIAQLRRLRDVAYTELMAVDA
FIDGHTPFATKHGVKGAEFENVLVIVGRGWNKYNFAQMLERLDPGPPADKVESFESNRNL
FYVACSRPKRRLALLFTQILSELAMAKVTALFGEANVIPLPADPAGGAAP
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctgacgaagagaccgccgccgacgcggccggccgccttgcacttgagcgtgtctat
gcgtgcttcgatgccggacaaagcttccggctcgaggcaggcgcgggcgcaggcaagaca
tattccctagaaaaggcgctgcgccgcctgatcgaacttcgcggtacggaacttgtgcgt
aagcgccaacagattggttgcatcacgttcacgaacgtggcgaaggatgagattatcgcg
cgcgttcaggcccacccggcggttcggccggagaccattcacggattttgttggtcagta
ttgcaggactttcagccccagctccgcgcgatcgtgcctgacttgccgggatggggagaa
cgtctcgccgatgccggggtgggggggctaggcgcgaggaaggtcaattacgacctcggc
tatccccgggtgacgccagacgaggtgtcattgaagcacgaagacgtgctgacgctgatg
acggagctgctggcacggcccaagtttcgcttagtgctagcgaagcgctatcccgtgctg
ctgattgacgaatatcaggacaccgatgcgggcttcgtagaggctctaaagcagcatttc
ctaggtacgggtacggggcctatcattggcctgttcggcgaccattggcagaagatctac
ggtgagggatgcggtgcggtcgagcacgcagcactcgaggtgatcgacaaaaacgccaat
ttccgatccgccgaacccatcgtcgcggtgctcaatcgcatgcgacccgatctcgaacag
atccccagcgacccggatgcgccgggtgaggctcgaatctttcacacgaatgcatggccg
ggccagcgccgaacgggccagggcggtggtcactggactggcgacacgagccccgaggcg
gcacgcgcctatctcgatcacctgaagcagcgattgtcggatgagggctgggactttgcc
gtcgaacgcaccaagatcctgatgctcagccacagcgtgctggcgaaggaacagggctat
ccgaccatccagagcatttatggccagttcaacgatgcctggctcaagaaagaagacccc
cacatcaaatttctggccgaccagctcgagccagcatgcgcggcctttcaggcgaagcgc
tatggcgagatgtttgagagcctaggcgccggcaggccgtgcatccgtcggcatcacgac
aaggtcgcatggacgcagtctctcgaacagcttatccaattgcgagcgaccggcacgatc
ggcgccgtcatcgacctcatcaaaggccaggctcacatgcatctgcccgaggcggtgctg
gaccgcgagcaacgcttggccgacgccggacccgaaccggtcgaaggcgagtctcggagg
atcgcccagctgcgaaggctacgggacgtcgcctacaccgagctgatggcggtggatgcg
ttcatcgatggtcacacgcccttcgccaccaagcacggcgtgaagggtgcggagttcgag
aacgtgctcgtcatcgtcggccgtggctggaacaagtataatttcgcgcagatgctggaa
cggctcgacccaggccccccggcagacaaggtcgaatccttcgagagcaatcgcaacctg
ttctacgtcgcgtgctccagaccgaagcgccgattggcgctgttgttcacccagattcta
agcgagctcgcgatggcgaaggtgacagctttgttcggcgaggccaatgtgatcccgctt
ccagcagatcccgcgggcggggccgcgccatga

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