KEGG T01678: SBI

Streptomyces bingchenggensis: SBI_03883

Entry

SBI_03883 CDS T01678

Gene name

kgd

Definition

alpha-ketoglutarate decarboxylase

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sbh Streptomyces bingchenggensis

Pathway

sbh00020	Citrate cycle (TCA cycle)
sbh00310	Lysine degradation
sbh00380	Tryptophan metabolism
sbh01100	Metabolic pathways
sbh01110	Biosynthesis of secondary metabolites
sbh01120	Microbial metabolism in diverse environments

Module

sbh_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sbh_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbh00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sbh00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sbh00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh 2-oxoacid_dh PHA_synth_III_E

Other DBs

NCBI-GI:

374986640

NCBI-GeneID:

11614345

UniProt:

D7CHE7

Position

4979281..4983111

AA seq 1276 aa
MSPQSPNSSSVSTDQQDGQGSNPAAAFGPNEWLVDEIYQQYLQDPNSVDRAWWDFFADYK
PGQDTSSAVAESAPAPAAGGAAGTGAAAPAPVSNGAAPAPVKPAAPAVPPAAQQAAPAPA
PVKPAAPAPAAAPAKAAPAAKTAPAKAAEPAAPGAGPEYVTLRGPSAAVAKNMNASLQLP
TATSVRAVPVKLLFDNRIVINNHLKRARGGKVSFTHLIGYAMVQALKAMPSMNHSFTEKD
GKPTLVKPEHINLGLAIDLVKPNGDRQLVVAAIKKAETLNFFEFWQAYEDIVRRARANKL
TMEDFTGVTASLTNPGGIGTVHSVPRLMPGQGLIIGVGAMEYPAEFQGTSQDTLNKLGIA
KVMTLTSTYDHRVIQGAASGEFLRIMSQLLLGENDFYDEIFKALRIPYEPVRWLRDIDVS
HDDDVTKAARVFDLIHSYRVRGHVMADTDPLEYRQRKHPDLDIIEHGLTLWDLEREFAVG
GFAGKTMMNLRDILGVLRDSYCRTTGIEFMHIQDPKQRKWIQDRVERPHAKPERDEQLRI
LRRLNAAEAFETFLQTKYVGQKRFSLEGGESVIPLLDAVLDAAAESRLDEVVIGMAHRGR
LNVLANIVGKSYAQIFREFEGNLDPKSMHGSGDVKYHLGAEGTFTGLDGEQIAVSLTANP
SHLEAVDPVLEGVVRAKQDIIGKAGTDFTVLPVALHGDAAFAGQGVVAETLNMSQLRGYR
TGGTVHIVINNQVGFTAAPAASRSSMYATDVARMIEAPIFHVNGDDPEAVVRVARLAFEF
RQAFNKDVVIDLICYRRRGHNETDNPGFTQPLMYDLIDKKRSVRKLYTESLIGRGDITLE
EAEQALQDFQGQLEKVFTEVRDATSQPTPTAVPEPQPEFPVAVSTAVSQEIVKRIAESQV
NIPDRITVHPRLYPQLQRRAAMIEDDTIDWGMGETLAIGSLLMEGTPVRLAGQDSRRGTF
GQRHAVLVDRETGEDYTPLLYLTDEQARYNVYDSLLSEYAAMGFEYGYSLARPDALVMWE
AQFGDFVNGAQTIVDEFISSAEQKWGQTSGVTLLLPHGYEGQGPDHSSARIERFLQLCGQ
NNMTVAAPTLPSNYFHLLRWQVHNPHHKPLVVFTPKSMLRLKAAASKTEEFLNGSFRPVI
GDETVDPAAVRKVVFTSGKVYYDLAAERDKRGLTDTAIIRLERLYPLPGAELQAEIAKYS
GVQKFVWAQEEPANQGAWPFVALNLIDHLELSVGADLPASERLVRVSRPHSSSPAVGSNK
RHQAEQQALVNEVLEI

NT seq 3831 nt +upstreamnt +downstreamnt
gtgtcgccacagtcccccaacagttcgagcgtctcgaccgaccagcaggacggtcagggg
agtaaccctgccgccgcgttcggtcccaacgagtggctcgtcgacgagatctaccagcag
tacctccaggacccgaactcggtcgaccgagcctggtgggacttcttcgccgactacaag
ccgggccaggacaccagctccgcggtggccgagtccgcgccggccccggccgctgggggg
gcggcgggtaccggcgccgccgcgccggccccggtgagcaacggtgccgcgccggctccg
gtgaagcccgccgccccggccgtgccgcccgccgcccagcaggccgccccggccccggct
ccggtgaagcccgcggctccggccccggccgccgcgccggccaaggccgcgcccgccgcc
aagactgcgccggccaaggccgccgagccggccgccccgggcgccggtccggagtacgtc
acactgcgtggcccctcggccgccgtggcgaagaacatgaacgccagcctccagctgccg
acggccacctccgtgcgcgccgtcccggtcaagctgctgttcgacaaccgcatcgtcatc
aacaaccacctcaagcgcgcccgtggcggcaaggtgtccttcacgcacctgatcggctac
gccatggtgcaggcgctgaaggcgatgccctcgatgaaccactcgttcaccgagaaggac
ggcaagccgaccctggtcaagcccgagcacatcaacctcggcctcgccatcgacctggtc
aagcccaacggcgaccgccagctcgtcgtcgcggcgatcaagaaggccgagacgctgaac
ttcttcgagttctggcaggcctacgaggacatcgtccgccgcgcccgcgcgaacaagctg
acgatggaggacttcaccggcgtcaccgcctccctcaccaacccgggcggcatcggcacc
gtgcactccgtgccgcggctgatgcccggacagggcctgatcatcggcgtcggcgccatg
gagtacccggccgagttccagggcacgtcgcaggacaccctgaacaagctgggcatcgcc
aaggtcatgacgctgaccagcacctatgaccaccgggtgatccagggcgccgcctccggc
gagttcctgcggatcatgagccagctgctgctcggcgagaacgacttctacgacgagatc
ttcaaggcgctgcggatcccgtacgagccggtccgctggctgcgcgacatcgacgtctcg
cacgacgacgacgtcaccaaggccgcgcgcgtcttcgacctgatccactcctaccgggtc
cgcggccacgtcatggccgacaccgacccgctggagtaccgccagcgcaagcaccccgac
ctggacatcatcgagcacgggctcaccctgtgggacctggagcgcgagttcgccgtcggc
ggcttcgccggcaagacgatgatgaacctgcgcgacatcctgggcgtgctgcgcgactcg
tactgccgcaccaccggcatcgagttcatgcacatccaggacccgaagcagcgcaagtgg
atccaggaccgcgtggagcgcccgcacgccaagccggagcgcgacgagcagctgcggatc
ctgcgccggctcaacgcggccgaggcgttcgagaccttcctgcagacgaagtacgtcggc
cagaagcgcttctcgctggagggcggcgagtccgtcatcccgctgctcgacgcggtgctg
gacgccgccgccgagtcgcgcctggacgaggtcgtcatcggtatggcccaccgcggccgg
ctcaacgtcctcgccaacatcgtcggcaagtcgtacgcgcagatcttccgcgagttcgag
ggcaacctcgacccgaagtcgatgcacggctccggcgatgtgaagtaccacctgggcgcc
gagggcaccttcaccggcctggacggcgagcagatcgccgtctcgctgaccgccaacccc
tcccacctggaggcggtggacccggtcctggagggcgtggtccgcgccaagcaggacatc
atcggcaaggccggcaccgacttcaccgtcctgcccgtcgccctgcacggcgacgccgcc
ttcgcgggccagggcgtcgtggccgagacgctgaacatgtcgcagctgcgcggctaccgc
accggcggcaccgtgcacatcgtcatcaacaaccaggtcggcttcaccgccgccccggcc
gcgtcccgctcctcgatgtacgccacggacgtcgcgcgcatgatcgaagcgccgatcttc
cacgtcaacggcgacgacccggaggccgtggtgcgcgtcgcgcgcctcgccttcgagttc
cgccaggcgttcaacaaggacgtggtcatcgacctcatctgctaccgccgccgcggtcac
aacgagaccgacaaccccggcttcacccagccgctgatgtacgacctgatcgacaagaag
cgctcggtgcgcaagctctacaccgagtcgctgatcggtcgcggcgacatcaccctggaa
gaggccgagcaggcgctgcaggacttccagggccagctggagaaggtcttcaccgaggtc
cgcgacgccacctcccagccgaccccgaccgcggtccccgagccgcagccggagttcccg
gtggcggtctccacggccgtcagccaggagatcgtcaagcggatcgccgagtcccaggtc
aacatccccgaccggatcaccgtccacccgcggctgtacccgcagctccagcggcgcgcg
gcgatgatcgaggacgacacgatcgactggggcatgggcgagaccctggccatcggctcg
ctgctgatggagggcacccccgtccgcctggccggccaggactcccgccgcggcaccttc
ggccagcgccacgcggtgctggtggaccgggagaccggcgaggactacaccccgctgctc
tacctcaccgacgagcaggcccgctacaacgtctacgactcgctgctcagcgagtacgcg
gcgatgggcttcgagtacggctactcgctggcccggccggacgcgctggtcatgtgggag
gcccagttcggtgacttcgtcaacggcgcgcagacgatcgtcgacgagttcatcagctcg
gccgagcagaagtggggccagacctccggcgtcacactgctgctcccgcacggctacgag
ggccagggcccggaccactcctcggcccgtatcgagcgcttcctccagctgtgcgggcag
aacaacatgacggtcgccgcgccgacgctgccgtcgaactacttccacctgctgcgctgg
caggtgcacaacccgcaccacaagccgctggtcgtcttcaccccgaagtcgatgctgcgt
ctgaaggcggcggcctccaagaccgaggagttcctgaacggctccttccgcccggtcatc
ggcgacgagacggtcgacccggccgcggtccgcaaggtcgtcttcacctcgggcaaggtc
tactacgacctggccgccgagcgggacaagcgcgggctgacggacacggccatcatccgg
ctggagcggctgtacccgctgccgggcgccgagctgcaggccgagatcgccaagtactcc
ggcgtccagaagttcgtctgggcgcaggaggaaccggcgaaccagggcgcgtggccgttc
gtcgcgctcaacctgatcgaccacctggagctctcggtgggcgcggacctgccggcctcc
gagcggctcgtccgggtgtcccggccgcactcctcctccccggcggtggggtcgaacaag
cggcaccaggcggagcagcaggcgctggtcaacgaggtcttggagatctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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