KEGG T01678: SBI

Streptomyces bingchenggensis: SBI_07002

Entry

SBI_07002 CDS T01678

Definition

exodeoxyribonuclease V

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sbh Streptomyces bingchenggensis

Pathway

sbh03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sbh03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 HHH_5 Viral_helicase1 AAA_11 Helicase_RecD AAA_22 PhoH PIF1 AAA_16 HHH_2 AAA_10 UvrD_C HTH_IclR AAA_28 AAA AAA_12 DAP3 DUF258 TrwB_AAD_bind

Other DBs

NCBI-GI:

374989758

NCBI-GeneID:

11612960

UniProt:

D7C1Q7

Position

8377127..8379337

AA seq 736 aa
MLKLAVVEGVLERITYANEENGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPVFADRITEHFGLDTLQIIEEE
PKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYKKYGDASISVV
KNEPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSTDNGHCFLPEEQL
IADSVKLLQVDTGLVIECLAELADEEGVVRESVPGPDGGEPVTAVYLVPFHRAEISLAGQ
TLRLLRGAEDRMPAFQDVDWDKALAWLARHTGADLAPEQSQAVRLALTEKVAVLTGGPGC
GKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDR
DRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLADG
SPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPITHGMPDFFLFAEEDTEAAGKLTVDVA
ARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQSITPARPDLPERRFGGRIFRVG
DKVTQIRNNYEKGANGVFNGTVGVVTSLDSDEQRLTVLTDEDEEVAYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVSA
GRRCTALDHRLGSFST

NT seq 2211 nt +upstreamnt +downstreamnt
atgctcaaactcgcggtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
aacggctatacggtcgcccgggtcgacaccggccgcggctccggggatctgctcaccgtc
gtcggctcgctgctgggcgcgcagcccggcgagtcgctgcggatggagggccgctggggc
tcccacccgcagtacggcaagcagttcaccgtcgagaactacaccaccgtgctgcccgcc
accgtccagggcatccggcgctatctgggctccggcctgatcaagggcatcgggcccgtc
ttcgccgaccgcatcaccgagcacttcggcctggacaccctgcagatcatcgaggaggag
ccgaagcggctgatcgaggtccccggcctcggcccgaagcgcacgaagaagatcgccgat
gcctgggaggagcagaaggcgatcaaggaggtcatgctcttcctccagacggtggaggtg
tccacgtccatcgccgtgcggatctacaagaagtacggcgacgcctcgatctcggtcgtg
aagaacgagccgtaccggctggccgccgatgtctggggcatcggctttctgaccgccgac
aagatcgcccagtccgtcggcatcccgcatgacagccccgagcgggtgaaagccggattg
cagtacgcgctgtcccagtcgacggacaacggccactgcttcctccccgaggagcaactg
atcgcggactcggtcaagttgctccaggtcgacaccggcctggtcatcgagtgcctggcc
gagctggccgacgaggagggcgtggtgcgcgagagcgtgccgggcccggacggcggcgag
ccggtcacggccgtgtatctggtgccctttcaccgcgccgagatctccctcgcaggtcag
acgctgcggctgctgcgcggcgcggaggaccgtatgcccgccttccaggacgtggactgg
gacaaggcgctggcctggctcgcccggcacaccggggccgatctggcccccgagcagagc
caggcggtgcggctcgcgctgaccgagaaggtcgcggtgctgaccggcgggccgggctgc
ggcaagtccttcacggtgcggtccgtggtggagctggcgcgcgccaagaaggccaaggtg
gtgctcgcggcccccaccggccgggccgccaagcggctcgccgagctgaccggcgccgag
gcgtccacggtccaccggctgctggagctcaagcccggcggggacgcggcgtacgaccgg
gaccggccgctggacgccgatctggtggtggtggacgaggcgtccatgctcgatctgctg
ctggccaacaaactggtcaaggcggtcccgccgggcgcccatctgctcttcgtcggggat
gtggaccagctgccgagcgtcggcgcgggcgaggtgctgcgcgatctgctggccgacggc
agccccgtcccggcggtgcggctgaccaggatcttccgccaggcccagcagtccggcgtg
gtcaccaacgcccaccggatcaactccggcgtgccgccgatcacccacggcatgcccgac
ttcttcctgttcgccgaggaggacaccgaggccgccgggaagctcacggtggatgtggcg
gcccgtcggatccccgccaagttcggcctcgacccgcgccgggatgtgcaggtcctggcc
ccgatgcaccgtggcccggcgggcgccgggacgctcaacggcctcctccagcagtccatc
acccccgcccggccggatctgcccgagcggcgcttcggcggccggatcttccgcgtcggc
gacaaggtcacccagatccgcaacaattatgagaaaggggccaatggggtcttcaatggc
acggtgggcgtcgtcacctccctcgacagcgatgagcagcgcctgaccgtgctgaccgac
gaggacgaggaggtggcgtacgacttcgacgagctggacgagctggcacacgcctatgcg
gtgaccatccaccgctcacagggcagcgagtacccggccgtggtcatcccggtgaccacc
ggcgcctggatgatgctgcagcgcaatctgctgtatacggcggtgacccgcgccaagcgc
ctggtggtgctcgtcggctcgcgccgcgccctgggacaggcggtgcggacggtgtcggcg
ggcaggaggtgcaccgcactggaccaccggctcggctcgttcagcacctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system