KEGG   Sorghum bicolor (sorghum): 8056867
Entry
8056867           CDS       T01086                                 
Name
(RefSeq) nuclear pore complex protein NUP155
  KO
K14312  nuclear pore complex protein Nup155
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8056867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8056867
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8056867
SSDB
Motif
Pfam: Nucleoporin_N Nucleoporin_C
Other DBs
NCBI-GeneID: 8056867
NCBI-ProteinID: XP_002468247
UniProt: C5WSM7
Position
1:complement(72804040..72815842)
AA seq 1477 aa
MAWGEDEAIGPDVASAGLHVSERIGRDAAAQPDLEEALEASRYASHPYSSHPKEWPSLVE
VAETRQLPPMVIERYNTVAGEGTALCGIFSDIHRAWATVDNSFFVWRFDKWDGQCQEHNV
DDQAICAVGLARAKPGIFIEAIQYLLVLATPVELILVGVCCSASADGTDPYAELSLQPLP
EYMIATDGVTMTCITCTDKGQIFLAGRDGHIYELQYTTGSGWRKRCRKVCLTTGIGSLLS
RWVLPNAFKFSTVDPIVDMVMDEERNTIYARTEGMKLQLFDLGANGDGPLTKIAEEKNIV
DPRDAPYGGRRPNARRAAQSPKPSIVCISPLSAMESKWLHAVAVLSDGKRLFLTTSGGSG
SSVGLNSGLQRPTCLKIVATRPSPPLGVGGGLTFGAVSAAGRAHPEDLALKVESAFYSAG
ALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFGTASRTSRALRETVSALPVEGRMLCASD
VLPLPDAAYTMQSLYADVECFTGFRKPSEKACIKLWAKGDLPTQHILPRRRVVVFNTMGL
MEVIFNRPVDILRKLFDGNTLRSQIEEFFNRFGAGEAAAMCLMLAAKLLYAEDSLISNAV
SEKAAEAFEDPGLVGMPQIDGTTALSNTRTQAGGFSMGQVVQEAEPLFSGAYEGLCLCSS
RLLYPIWELPVMVIRGPAGTNKREDGVIVCRLSAGAMKILESKIHSLETFLRSRRNKRRG
LYGHVAGLGDSGSILYKTGPIIGPGGHINGRSPYNSQIRDMNPADKSASNKKPRLLYTSA
ELAAMEVRAMECLRRLLRRSGEALFLLQLICQHNVARLAQTLGNDLRKKLVQLTFHQLVC
SEDGDQLAMRLISALMEYYIGPEGRGTVEEISTKLREGCPSYFNESDYKYYLAVECLERA
SMTNNPDERDILARDAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQKAQALDSNA
DVINGQIDPRHHDTIMLQRQQCYEIVMNALRTLKGVGHSRMQSADKSSGLATAVDPASRS
KYIKQIIQLSVQWPDTVFHEHLYRTLIELGLENELLEYGGSDLVSFLQSAGRKHQEEVRS
ISSVTSGAAKLHDLGAPISTSQTKYLELLARYYVRKGEHIAAARMLLILAERQCSNSEEA
PTLDKRYEYLRDAVLQAKSAGISADSSRNPIDSSTVDLLEGKLAVLRFQMQIKQELELMA
ARIENIPSSSESPSVPFPRDNILADAETAKAAKDKANELSLNLKSITQLYNDYAVPFGLW
EVCLEMLSFANYSGDTDSKIVREIWARLLDQTLTKGGVAEACSVVKRVGSKLDPADGACL
PLDIICLHLEKAALDRLSSGEELVGDDDVSRALLGACKGLPEPVLAVYDQLLSNGAIIPS
LNLKLRLLRSVLAILREWGISVVAHRLGTTSAGASFFLDGTFSMNQTGTANQGARDKIIS
LANRYMTEVRRLNLPQNQTEDVYRGFRELEEKLLSPY
NT seq 4434 nt   +upstreamnt  +downstreamnt
atggcgtggggggaggacgaggccattggccccgacgtggcctcggcgggtcttcacgtc
tcggagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcccttgaagcc
tcgcgctacgcgtcccacccctactcctcgcaccccaaggagtggccttctttggtggaa
gttgcagaaactcgtcaacttcctcctatggtgattgaaagatataacacagttgccggt
gaaggaacagctctttgcgggattttttctgacatacatcgggcctgggcaacagttgac
aattcatttttcgtctggcgttttgataaatgggatgggcagtgccaagagcataatgtt
gatgatcaagcaatttgtgctgttggccttgctagggcaaagcctgggattttcattgaa
gccattcaataccttttagttttagcaactcctgttgagctgatacttgttggagtttgc
tgttctgcaagtgctgatggaacggacccatatgctgagctttcattacaacctttaccc
gagtacatgattgccactgatggtgtcacaatgacatgcatcacatgtacagacaaaggc
caaatttttctagctggtcgcgatggccatatatatgaattgcagtatacaactggttca
ggttggcgtaaacgctgccgtaaagtttgtcttactactggtattggcagccttctttct
aggtgggtactgccaaatgcattcaaattctcaaccgttgatccaattgttgatatggtc
atggatgaggagaggaacactatctatgcgcgtaccgagggcatgaaattgcaattattt
gatctaggagctaatggtgatggccctttgacaaaaattgctgaagaaaagaacattgtt
gatccacgggatgcaccctatggtggtcggaggcctaatgcgcgaagagctgcacaatca
ccaaaaccatcaattgtttgcatctcacctctatctgctatggaatcaaaatggctccat
gctgttgctgttttatcagatgggaagagattattcctcactacatccggtgggagtggt
tcttctgttggattgaacagtggtctgcagaggccaacctgtttaaaaattgttgctact
aggccgtccccacctctgggggttggtggtgggcttacatttggtgctgtttctgcggct
ggcagagctcatcctgaggatctagctttgaaagttgagtctgctttctattctgctggt
gctcttataatgtcagattcatctgctacagccatgtcatctcttctggctgtgcagaaa
gattcagctgcgcagctatcccttcccagtaccttcggaacagcttctagaacctcccga
gctctacgagaaacagtctctgctttgcctgttgagggtcgaatgctttgtgcctctgat
gtcttaccacttcctgatgctgcttacacgatgcagtctttgtatgctgatgtggaatgc
ttcacaggtttcagaaaaccctctgagaaggcatgtataaaactgtgggcaaaaggagat
cttcctacccagcacatcttgcctcggaggagggttgttgtattcaatactatgggtttg
atggaggtaatttttaacaggcctgttgatattctaaggaaattgtttgatgggaacacc
ctgagatcacaaattgaagaattctttaatcgctttggtgctggagaggctgcagcaatg
tgcttaatgctagctgcgaagctactttatgctgaagatagtctgataagcaatgctgtt
tctgagaaagctgctgaggcatttgaggaccctgggcttgttgggatgcctcaaattgat
ggcaccactgctttatctaatacacgaactcaagctggaggctttagtatgggccaagtt
gttcaagaagcagaacctttgttttctggtgcatacgaaggcctttgtttgtgctcgtca
agactactttatcccatatgggagctccctgttatggtgattcgaggaccggctggtact
aataaacgcgaggatggcgtaattgtttgcaggctttcagctggggccatgaaaattctt
gagagtaagattcattctctggaaacatttttaagatctagaaggaacaagagaaggggc
ctttatggtcatgttgctggtcttggcgattctggttccatactctacaaaacagggcct
attattggtcctggagggcatatcaatggcaggagcccatacaactcccaaattcgagat
atgaaccctgcagacaaatctgcatcaaataaaaagccaaggctactttatacatcagca
gaactagctgctatggaggtgagggcaatggagtgtcttaggcggttgcttaggagatct
ggtgaagcactctttctgcttcaacttatttgccagcataatgttgcccgtttggctcag
acgctgggcaatgatttacgcaagaaattagttcagttaacatttcatcaattggtatgt
tcggaggatggtgatcagcttgcaatgcgtcttatttctgcactcatggagtactatatt
ggcccagagggcagaggaactgttgaagaaatcagtacgaagttgagggagggttgccct
agttacttcaacgagtcagactacaaatattacttggcagtggagtgccttgagagagca
tctatgactaataaccccgatgagagagatattcttgctagagatgctttcaacctcttg
actaaaattccagactctgctgatttgagtgccatatgcaagagattcgagaacctaaga
ttttacgaggctgtagtccggttgcctctgcagaaagctcaagcacttgactccaatgct
gatgttatcaatggtcaaattgatccaaggcatcatgataccataatgttgcagcgtcaa
caatgctatgagattgttatgaatgctctgcggactctcaagggtgtcgggcatagtcga
atgcaaagtgcagacaagtcatctggtctagcaactgctgttgatccagcttctcgaagc
aagtacatcaaacaaattatccaacttagtgtccaatggccagacacagttttccatgag
catctatacagaacactaattgagctcggtctagaaaatgagcttttggagtatggtggt
tctgatttggtttcttttctgcagagtgctggtcgtaagcatcaggaagaggttcggtca
atttcttcagttacatctggagctgctaagttgcatgatttaggtgcacctatctcgact
agtcaaacaaagtatcttgagctcctagctaggtactatgttcgcaagggggagcatatt
gctgctgccaggatgttgttaatattggcagagcgacagtgctccaattccgaagaagct
ccaactcttgacaagaggtatgaatatctcagagatgcagtgcttcaggccaaaagcgca
ggcatctctgctgattcgtctagaaatcctattgatagtagcacagtggatttgcttgaa
ggcaaacttgccgtgctacgcttccaaatgcaaatcaaacaagaattggagctcatggct
gcgcggattgaaaatattccaagcagttctgaatcacctagtgttccattccctcgggac
aacattcttgccgacgcagagactgctaaggctgctaaggataaggcaaatgaactatca
ttgaatctcaagagtatcactcaactgtataatgattatgctgttccatttggtctctgg
gaggtttgcctggaaatgctgagctttgctaattactctggagacactgatagcaaaatt
gttcgagaaatttgggctagactccttgatcagacacttacaaaaggtggtgttgcagaa
gcatgttctgtggtgaaaagagtaggctcgaaacttgatcctgcagatggagcttgttta
cctttagatataatatgccttcatcttgagaaggctgcattggatagattaagttcagga
gaagaattagttggtgatgatgatgtttcaagagctcttcttggtgcctgtaaaggtctt
cctgaacctgtacttgctgtatatgatcaactgttatctaatggtgcaatcataccctca
ctaaatctgaagttgcgcctgctgcgatcagttcttgcaatcctccgtgagtgggggata
tctgtcgttgcacataggctaggcaccacaagtgctggggcttcattctttcttgatgga
acattctcaatgaaccaaacagggactgcaaatcaaggtgctcgagataaaataattagt
ttggcgaacaggtacatgactgaggtgaggcgattaaaccttccacagaaccaaacggag
gatgtctaccgcggtttccgtgaacttgaggagaaattactatctccttattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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