KEGG   Sorghum bicolor (sorghum): 8059275
Entry
8059275           CDS       T01086                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbi03000]
    8059275
   03036 Chromosome and associated proteins [BR:sbi03036]
    8059275
Transcription factors [BR:sbi03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    8059275
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    8059275
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ADD_ATRX IlvC
Other DBs
NCBI-GeneID: 8059275
NCBI-ProteinID: XP_021303388
Position
1:complement(22219024..22234390)
AA seq 1501 aa
MNKDGILSDDKMAKMESVQPNGQLVDIIIIDSQSDENKIGVDTSTSIGDSSLKEYKEPPC
TTMDNNANEETSITDDDTESDSYESSLRESDNEQASASVEGTEVPLTEEEVEELVAEFLE
VESKAAQAQESLEKESLDKVEIEVRLELSERLQGDELESAVSTEMEQFQMQWENELDDLE
IRSSILLEQLDAAGIELPRLYKSIESQVPNVCETEAWKSRTHWAGSQVPEEANRSIKNAD
EYLQSRRPVRRKHGRLLEEGASGFLTGKIPVEDDDSVKCHEKSWSSFNELIKSKENAENT
FGSSNWASVYLASTPQEAAALGLQFPGVDEVEEISEVGGVFDDIKGVDEVELSEEQRRKY
RKVTEEDDAKIMKCLQRRLKGKRTRGWCKENIGLVSSCDEKPLPENGVLGAKSDLPSSKK
LKTDENKVSMETLKHTFEDDDNEKRLKTVIIESDDDMQTDNKRALQKDGEGSSTEVEKVV
DIIDLDLFPSQSPKLPTKSLPKTFKCTICSEMLNASDVHRHPVLDVVVCGSCRFLVIEKN
RLEDPVSGGYCTWCARSELLQSCSSCKLLFCTNCLSKNLGEECLSEAKATGWQCCCCIPS
QLELLISECDKALGGVESSDSESSNTELSGPENSATVSKRRMKKSIRRIMDDTELGEETK
RRIAMEKARQDHLKSMQEQSATKLRSENIGTPFEAPVKICLQDAGDGHIVNLAREEDEEP
VRIPSSMSSKLKPHQVEGIRFMWENVIQSVKKVKSGDKGLGCILAHNMGLGKTFQVITFL
YTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTR
WRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEIAYALQVTYHVPAIGTVSSSLYCQCGPD
ILVCDEAHMIKNRRADITQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSTH
EFRNRFQNPIENGQHMNSTSDDVKIMNQRSHILFEQLKGFVQRKSMNVVKNDLPPKKVFV
ITVKLSQLQRKLYKRFLDVHGFSSSGYSEKSHSSFFAKYQTLAQVWNHPGLLQMAKEQRG
NLRREDTVENFMMDESSSDDNVENYLPNGEKQKDRADQQSKKSNIVNEESNWWEELLDEN
TYMEADYSGKMTLLLDILSKSSELGDKVLVFSQSLTTLDLVEFYLAKLQINGKEGKHWKR
GKDWYRLDGSTPSSERQNLVEMFNDPGNTRVKCTLISTRAGSLGINLHAANRVVLLDGSW
NPTHDLQAIYRVWRYGQTKPVYAYRLMAHRTMEEKIYKRQVTKEGLAARVVDRQQVSRTI
SKEEMLHLFEFGEEELMEQNENGSTIIEKPSTSDTIKTSEPVPVDSLMLSLLSEQTRWIS
GYHEHEALLQENEEERLTKEEKDMALSEWESLRKAALDSERKSNMSAAPTYPNVVRPLKP
ASRSRQLQQPKVNSNNQKKCNNLTHLLTLRSHGTKAGCTTTCDECGQEISWETLNRDGRS
R
NT seq 4506 nt   +upstreamnt  +downstreamnt
atgaataaggatggaatattgtctgatgataagatggcaaagatggaatctgttcaacca
aatggacagctagtagatataataatcatcgactctcaaagtgatgaaaataaaattggt
gtggatactagtactagcataggagacagttcattgaaggagtataaggagcctccatgc
acaacaatggacaacaatgcgaatgaagaaacatccattactgatgatgatacagagtcc
gattcatatgaaagctctctccgagaatcagataatgaacaagcttcagcatctgtggaa
ggcactgaggtacctcttactgaggaagaagttgaagaattggttgctgaattcctcgaa
gtcgagagcaaagcagctcaagcgcaagagtcacttgaaaaggagtcactggacaaagtt
gaaattgaagtaagattggagttatctgagaggcttcaaggagatgagttagaatcagct
gtgtcaactgagatggagcaattccagatgcaatgggaaaatgaacttgatgatctagag
atccgtagttctattctgttggaacaacttgatgctgctggaattgaacttcccagactc
tataagtcaattgaaagtcaagttccaaatgtttgtgaaactgaagcatggaagagcagg
acacattgggctggttctcaagtgcctgaagaagctaaccgatccattaaaaatgctgat
gaataccttcagtctcgcagacctgtacggagaaaacacgggaggttgctggaggaaggt
gctagtggctttcttactggaaaaattcctgttgaggatgatgattctgttaagtgtcat
gagaaaagttggagctctttcaatgaacttattaaatctaaggagaatgctgagaataca
tttggtagcagtaactgggcatcagtttatcttgcaagcaccccccaggaagcagccgca
ttaggtctccagtttcctggagttgacgaggtagaggagatatctgaagttggtggtgtt
tttgatgatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaaatac
agaaaggttacggaagaggatgatgcaaaaataatgaagtgcctgcagcgtcgtttgaaa
ggaaaaaggacgaggggctggtgtaaggagaacattggtttggtctcatcatgtgatgag
aaacctctaccagaaaatggtgttttaggtgctaaaagtgatcttccttcatctaaaaaa
ctcaaaactgatgaaaacaaagtttctatggagacattgaagcatacatttgaagatgat
gataacgagaagagattgaaaactgttataatagaaagtgatgatgatatgcagacagat
aacaaacgagctttacaaaaggatggtgaaggtagttccacagaagtcgaaaaagtggtt
gatatcattgatcttgatcttttcccatcacaaagccctaagctccctactaagagtttg
cctaaaactttcaaatgtactatttgctctgaaatgttgaatgcctctgatgtgcatcgc
caccctgtcttggatgttgttgtttgtggatcatgcagatttcttgtgatagagaagaat
cgtcttgaggatcctgtatctggtggttattgcacttggtgtgcacgaagtgaactgctt
caaagttgtagttcttgtaagcttcttttctgtacaaattgcctgtcaaagaatttaggt
gaagaatgcttatcagaagctaaagccactggttggcagtgttgctgctgcatacccagt
caactggaacttttaatttctgaatgtgacaaggccctcggtggcgtggaatcttctgat
tcagagagtagcaacacagagctttctggaccagagaatagtgcaactgttagcaagcga
agaatgaagaagagtattagaagaattatggatgatacagaacttggtgaggaaacaaag
cgtagaattgcaatggagaaggcaaggcaagaccatttgaagtccatgcaagagcaatct
gccaccaagttaaggagtgagaatattggaactccctttgaagctccagtgaaaatctgt
ttacaggatgctggtgatggacatatagtcaaccttgccagggaggaggatgaggaacct
gttaggattccaagcagcatgtcttctaaactgaaacctcatcaggtagaaggaataagg
tttatgtgggaaaatgttattcaatctgttaaaaaggtcaaatccggggataaaggtctt
gggtgcattttggcgcataacatgggccttgggaaaacctttcaggttattacattcctc
tatactgttatgagatgtgctcaattgggattgcgcacagcacttgttgtcacccctgtc
aatgttcttcataactggaggaaagagtttagcaagtggcgtccagcagagctgaaacct
cttcgtgtttttatgttggaagatgttgcaagggtgaaaaggccagatttactaaccaga
tggcgagtgaagggtggagtgcttctcattggttattcatcatttaggaacttatccctt
ggaaagcatgtgaaggacaaaaattctgcaaacgaaattgcttatgctttgcaggtgacg
taccatgtccctgctatcggtactgtttcaagttcactgtactgccagtgtgggccagat
attcttgtatgtgatgaagcacatatgataaagaacaggagggccgacattacgcaagct
ctgaaacaagtaagaacacagagaagaattgctttaactggatctccgttgcagaataat
ttgatggaatattattgtatggttgattttgtcagggaaggttttcttgggagtactcat
gaattccgaaacaggttccagaacccaattgaaaatgggcaacacatgaattcaacatca
gatgatgtcaagatcatgaaccaacgatcacacatcttgtttgaacaactgaaaggtttt
gtccagcggaagagcatgaatgttgtgaagaatgatctaccaccaaagaaggtttttgtt
attactgtaaagctctctcagctgcagaggaagctatacaaaaggttcttagatgttcat
ggtttctcaagtagtggttattcagaaaaatctcacagttccttctttgccaagtaccaa
acattagcccaggtatggaatcatccggggctcctccagatggctaaagaacagagagga
aatttgcgtcgtgaagacactgttgagaactttatgatggatgagagttcaagcgatgat
aatgttgaaaattacttgcctaatggagagaagcagaaggatagagctgatcagcagtcc
aaaaaaagcaacattgtgaatgaggaaagtaactggtgggaggaacttttagatgagaat
acctatatggaagcagattacagtggcaaaatgaccttgctcctagatatcctgtcaaaa
agttctgaattaggcgacaaagtattagtttttagccagagtttgaccactctggattta
gtggagttttatctggcaaaactgcaaatcaatggaaaagaaggcaaacactggaagcga
gggaaggattggtacaggcttgatgggagcactccatcttctgaacggcagaatctcgtg
gagatgtttaatgaccctggaaacacaagagtgaaatgcacgttgatatcaactcgtgct
ggatccctgggtatcaaccttcatgctgcaaatcgcgtggttcttctggatggatcatgg
aatccaacacatgatttgcaagccatttatcgggtttggaggtatggccagaccaaacct
gtatatgcctaccgcctaatggcacatcgaacaatggaagagaaaatatataagcgccag
gtgacaaaagaaggccttgcagcaagggtggtggatagacagcaagtttcaagaaccatt
tccaaagaagagatgctgcatctttttgaatttggtgaagaggaattaatggaacagaat
gagaatggttctaccataattgagaagccatccacttctgacactattaaaacctctgag
cctgtacctgtcgacagtctcatgctgagcctactcagtgagcaaactcggtggatttca
ggttaccatgaacatgaagctctcctccaagaaaatgaagaagaaaggcttacaaaggag
gagaaagatatggctttgtcagagtgggagtcattgaggaaagctgcacttgattccgag
agaaaatcaaacatgagcgcagctccaacatatcctaatgttgtgcggccacttaagcct
gcttcgagaagccggcaactgcagcaacctaaggttaactcaaataatcaaaagaagtgc
aacaacttaacccacttgctgactctaagaagtcatggcacgaaagcagggtgcacgaca
acctgtgacgagtgtggccaggagattagttgggagactctaaacagagatggcagatcg
agatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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