KEGG   Sorghum bicolor (sorghum): 8061053
Entry
8061053           CDS       T01086                                 
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial isoform X1
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sbi03110]
    8061053
Chaperones and folding catalysts [BR:sbi03110]
 Heat shock proteins
  HSP100
   8061053
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small MCM AAA_5 AAA_22 Mg_chelatase RuvB_N Sigma54_activat T2SSE Sigma54_activ_2 AAA_28 AAA_16 IstB_IS21 AAA_14 nSTAND3 AAA_33 AAA_24 AAA_18 ABC_tran ResIII AAA_7 TIP49 TsaE DEAD AAA_29 RNA_helicase NACHT PhoH AAA_23 PduV-EutP
Other DBs
NCBI-GeneID: 8061053
NCBI-ProteinID: XP_021303242
Position
9:55646661..55650571
AA seq 490 aa
MFSAARRLLASRARARAFAMAAAAAPYSHSAGASPSRPRFPTPKEIHRGLDEFVVGQDKA
KKVLSVAVHNHYKRIYNESSNKCSVKSLARGGVTASCDDDIELEKSNILLIGPTGSGKTL
LAKTLARYVNVPFVIADATAITQAGYSGEDVESVIYKLLVAADFNIKAAEHGIVYIDEVD
KLTKKADCREDRRDVSGEGVQQALLKIFEGTVISVPRKRSQDNMPQGYVEVNTRNILFIC
GGAFFGLEKIVAERHQHPVGFGIPICHELRNCSWTTALQESCSIDTVENDDLIAYGLIPE
FIGRLPITVGLNNLSEEQLVQVVLREPKNAIGKQYKKLFKMNDVKLYFTDNALRMIAKKA
AAKETGARGLRSIMEDILTEAMFEIPDAREGKEKVIAVLVDEESVGPLHHRGYGAKIFRD
DGALELYVYHNNIKVPGLIQSNPRRRRIFRLCLLVALSATKLWIYQTFPCFSSIYEWIVL
MLCKINIFTQ
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgttctcagcggctcgccgcctcctcgcgtcccgcgcccgcgcccgcgccttcgccatg
gcggcggctgccgcgccctactcccactccgctggggcgtccccgtcgcggcctcgcttc
ccgacgcccaaggagatccacaggggcttggacgagttcgtcgtcggccaggacaaggcc
aagaaggtgctctctgttgctgtgcacaatcactacaagaggatatacaacgagtcatcc
aataagtgttccgtgaaaagcttggctcgtggtggtgtcactgcgagctgtgatgatgac
attgagcttgaaaagagtaacatccttctgattgggccgacagggtcaggtaaaacattg
ttagcaaaaacgttagctcggtatgtgaatgtgccattcgtgattgctgatgcaacagca
attacacaggctggatattctggtgaagatgtggaatctgtaatctacaaacttctagtg
gctgctgacttcaatattaaagctgcagagcatggtattgtgtacattgatgaagttgat
aagctcacaaagaaggccgactgccgtgaggatcgaagggatgtatctggagagggtgtg
cagcaggcattgttaaaaatatttgaaggaacagtcatcagcgtgccaagaaaaagaagt
caagataatatgccccagggttatgttgaggtcaatacacgaaacatacttttcatttgt
ggaggtgccttctttggcttggaaaagatagtcgcagaaagacatcaacatcctgttgga
tttggcataccaatatgtcatgagctgcggaactgcagctggacaactgctcttcaggaa
tcttgctctattgatactgttgaaaatgatgatcttattgcctacggcttgatcccagaa
ttcattggaaggttgccaataacagttggcctgaacaatcttagtgaagagcaattggtt
caagtagtgctcagggagcccaaaaatgcaataggaaagcaatacaagaagctattcaaa
atgaatgatgtgaagctttatttcactgataatgctctgcggatgatagcaaagaaggca
gccgcaaaagaaacaggagcccgagggctgcggtctataatggaggacattttgacagaa
gcaatgtttgagattcctgatgctagagaggggaaagagaaggtgattgctgttcttgtc
gacgaagagtctgtaggaccactacaccatcgaggatatggagcaaaaatttttcgggat
gatggagccttggaactgtatgtttaccataacaatatcaaggtgcccgggctgattcag
agcaaccccagacgcagacgcatttttaggctctgccttctagtcgcattatcggcgaca
aagctttggatttaccaaacatttccttgtttttcatcgatatatgaatggattgtattg
atgctatgcaagatcaacatttttacacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (31)   
   Pfam (31)   
All databases (42)   

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