KEGG   Sorghum bicolor (sorghum): 8065850
Entry
8065850           CDS       T01086                                 
Name
(RefSeq) TATA-box-binding protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8065850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbi03000]
    8065850
   03021 Transcription machinery [BR:sbi03021]
    8065850
Transcription factors [BR:sbi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    8065850
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     8065850
  RNA polymerase III system
    TFIIIB
     8065850
  RNA polymerase I system
    SL1/TIF-1B
     8065850
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 8065850
NCBI-ProteinID: XP_002466940
Position
1:complement(17455624..17458040)
AA seq 225 aa
MGLGLRSGSGAWGGGGGGQAAAPAMNDAHQPGVDLARHPSGFVPTLQNIVSTVNLGCKLD
LQQIASGARNAEYNPKRFAAVIVRIRDPKTTALVFASGKMVCTGAKSEEHSRLAGRKFAR
IVHKLGFQSARFKDFKIQNIVGSCDVKFPIRLEGLALASGTFANYEPEIFPGLIYRMVEP
KIVILIFVSGKIVLTGAKVREEIYTAFENIYPMLVQFRKRQQYIR
NT seq 678 nt   +upstreamnt  +downstreamnt
atggggctggggctgcgcagcgggagcggggcgtggggcggaggaggaggaggacaagcc
gcggcgccggcgatgaacgacgcgcatcagcccggagtggacctcgccaggcacccgtcc
ggcttcgtccccacactccagaacatcgtatcaacagtcaatttgggctgcaagttggat
ctgcaacaaatagccagcggtgctcgtaacgcagagtacaacccaaagcgtttcgctgcg
gttatcgtgaggataagggacccgaagacaacagcattggtatttgcttcagggaagatg
gtttgcactggagcgaaaagcgaagaacattcgaggcttgctgggaggaagtttgcgcgc
attgtccacaagctcggtttccaatcagctcggttcaaggatttcaagatccagaatata
gttgggtcatgtgatgtcaaatttcctattcgtctggagggcctcgctttggccagtggc
acatttgccaattatgagccagagatcttccctggactgatctaccgtatggtggagccc
aagatcgtgatcctcatcttcgtctctggaaagatcgtcctcactggagccaaggtgcgg
gaagagatatacaccgccttcgagaacatatacccgatgctcgtgcagttcaggaaacgg
cagcagtatattagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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