KEGG T01086: 8068408

Sorghum bicolor (sorghum): 8068408

Entry

8068408           CDS       T01086

Name

(RefSeq) probable protein transport Sec1b

K15292

syntaxin-binding protein 1

Organism

sbi Sorghum bicolor (sorghum)

Brite

KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8068408
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8068408
Membrane trafficking [BR:sbi04131]
Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    8068408
SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    8068408
Exosome [BR:sbi04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   8068408

SSDB

Motif

Pfam:

Sec1 DUF3982

Other DBs

NCBI-GeneID:

8068408

NCBI-ProteinID:

XP_021305713

Position

10:complement(2125941..2133839)

AA seq 654 aa
MSMDFGAPADDPKVFRNICRDRILKDLLKPDKDKETKSSWKVLIMDKFTVKIMAYACKMA
EITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSP
IPKELVTYIKNDSSVIPRIGALREMNLEFFAIDMQGFVTDHDMALNDLYGPSEQNSKKFN
DTISTMATRIATTFASLKEFPCVRYRAPKGDGSTKTKFDMVPKWLATAVWDIVSKYKSTI
PEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGNKYIYEVSKMDSEPEKKE
SLLEDHDPIWLELRHAHIADASERLYEKMNNFVAKNKAAQLSRDGGEVSTRDLQKIVQAL
PQYSEQVEKLTLHIEIAGKINRCIREYGLRDIGQLEQDLVFGDAGAKEVISILRSKQDMS
PENKMRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDDMDVINCLSYLDGSNTKKSSRTGT
FSLKFDAQKKKNAARTDKHDGEETWALSRFFPLIEELIEKLSKGELPLKEYPSMSEPSSA
PQGATQTASSTARPAQNQPMSMRSRRTPTWAKSRNSDDSQSSDSSVLRHASGDFKRLGNR
IFVFMVGGATRSELRTVHKLTMKMKREIVLGSSSIDDPPQFISKLKSIGSATKT

NT seq 1965 nt +upstreamnt +downstreamnt
atgtcgatggacttcggcgccccggcggatgatcccaaggtcttccgcaacatctgccgc
gaccggatactgaaggacttgctcaagcctgacaaagataaggagaccaaaagctcatgg
aaggttcttataatggataaatttacagtgaagatcatggcttatgcttgcaagatggca
gaaattaccgatgctgggatttcacttgtagaagatctgttcaagagaagggagccaatg
ccttcaatggatgcaatatactttcttcagccactgaaagaaaatgtcataatgcttctg
tctgacatgtctgggagatgtccactttacaggaaggcatacatcttcttcagctcaccg
attcctaaagaattggtaacttacataaagaatgacagtagtgtaataccacgcatcggt
gcactaagagagatgaatttggaattcttcgctattgacatgcagggctttgtaaccgac
catgatatggccctgaatgatttatacggcccgagtgagcaaaattccaaaaagttcaac
gatactataagcacaatggctactcgcattgcaactacatttgcatcattgaaggaattt
ccatgtgtgcggtatcgggcaccaaaaggagatggttccacaaaaactaaatttgatatg
gttccaaagtggcttgctaccgctgtttgggatattgtgtcaaaatataaatcaactatt
cctgaatttccccagaaggagacatgtgaactgctaattgtcgacaggcccatagatcag
atagcacctgttattcatgaatggacctatgatgcaatgtgccatgatctactcgaaatg
gatggcaacaaatacatatatgaggtatcaaagatggattcagaacccgaaaagaaggaa
tctttattagaggatcatgatcctatttggcttgaacttcgccatgctcacatagctgat
gctagtgagaggttgtatgaaaagatgaataattttgttgccaagaataaagcagcacaa
ctttcaagagatggtggtgaagtctcaacaagggatctgcagaaaatcgttcaagcatta
ccgcaatacagtgagcaagttgagaaattgacactacatatagagattgctggaaaaatt
aacaggtgtatcagggagtatgggctccgtgacattgggcaactggagcaggatttggtt
tttggagatgcgggagcgaaagaagtgatcagtatcctcaggtcaaagcaggatatgagt
ccagaaaacaaaatgaggttgctgattatatatgcaattgtatatccagagaagtttgaa
ggtgacaaaggggaaaagttgatgcagctagcgaagcttccacatgatgatatggatgta
ataaactgtttaagttacttggatggttcaaatacaaaaaagtcatcaaggactggtact
ttctctctcaaatttgatgcccaaaagaagaaaaatgctgccagaacagacaaacatgat
ggtgaggaaacatgggctttatcacgtttttttccgcttattgaggagctgattgagaaa
ctgagcaagggtgaattacctctaaaagagtacccatctatgagtgaaccaagttctgct
cctcaaggtgccacacaaactgcatcatcaactgcacgaccagcacaaaatcaaccaatg
tctatgagatcaaggcggacaccaacatgggcaaaatctcgaaattctgatgattctcaa
tcaagtgattcttcagtcctgagacacgcatcaggtgacttcaagaggctaggaaaccgg
atttttgtcttcatggttggtggagctactagatctgaattgcgcacggtgcacaagctt
acaatgaaaatgaagcgtgaaattgtcttgggctcttctagcatcgatgatcctccacaa
tttatttcgaagctcaagtcgataggtagtgctactaagacctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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