KEGG   Sorghum bicolor (sorghum): 8068656
Entry
8068656           CDS       T01086                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8068656
  09124 Replication and repair
   03420 Nucleotide excision repair
    8068656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8068656
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8068656
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     8068656
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     8068656
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 8068656
NCBI-ProteinID: XP_002439126
UniProt: A0A921Q932 C5YYE2
Position
9:802600..804274
AA seq 70 aa
MVNAIKGLFISCDIPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGEF
RDQNSYEKPQ
NT seq 213 nt   +upstreamnt  +downstreamnt
atggttaacgcaatcaaggggctgttcatctcctgtgatatacctatggcacagttcatt
gttaacctgaacgcctcgatgccaccatcggagaggttcattgtgcacatgcttgatcct
accaacatgtttgtgcagcctcatgtggcgcacatgatcaggagtaagataggggagttc
agggatcaaaacagctacgagaagccacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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