KEGG   Sorghum bicolor (sorghum): 8071535
Entry
8071535           CDS       T01086                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8071535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8071535
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8071535
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    8071535
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-ANAPC11 zf-RING_10 Prok-RING_4 Baculo_IE-1 TRAF3_RING DUF3039
Other DBs
NCBI-GeneID: 8071535
NCBI-ProteinID: XP_002442611
UniProt: A0A921QI10 C5YT07
Position
8:62301846..62304610
AA seq 232 aa
MAANVGESTSGSSSGADAGGSFECNICFELPQEPIVTLCGHLFCWPCLYKWLRIHSHSPE
CPVCKAIVEEDKLVPLYGRGKDRVDPRSKNVPGAADIPNRPAGQRPATAPQVDPNTHFPN
ANPNPWFMGGGIPLANARWGNYTFSAAFGGLFPLLSFQVHGFPDATAYGQPAGFPYGYGH
GHGHAFHGGHAGGHAHAAAAPRHGQQQQQADVYLKALLILVGFLVIASLITF
NT seq 699 nt   +upstreamnt  +downstreamnt
atggcggccaatgttggggaatcaacaagcggcagcagcagtggcgctgatgctgggggt
agctttgagtgcaacatatgcttcgagctgccacaggagccgatcgtgacgctgtgcggg
cacctcttctgctggccgtgcctctacaaatggttgcgcatccactcgcactcccccgag
tgcccagtgtgcaaggccatcgtcgaggaggacaagctcgtccccctgtacggccgtggc
aaggaccgtgtggacccaaggtcaaagaacgtccccggggcggcagacatccccaaccgt
ccggctggacagaggcctgccacggctccgcaggtcgaccccaacacccacttccccaac
gccaacccgaacccgtggttcatgggcgggggcatcccgctggcgaacgcgcggtggggg
aactacaccttctcggcggcattcgggggcctgttcccgctgctcagcttccaggtgcat
gggttcccggacgccaccgcctatggccagcctgctgggttcccttacggatatggccac
ggccatggccatgcgttccatggcgggcatgctggaggacatgcccacgccgccgcagct
cctcggcatgggcagcagcagcagcaggcggatgtgtacctcaaggcgctgctcatcctg
gttggctttctggtgattgcgagcctcatcacgttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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