KEGG   Sorghum bicolor (sorghum): 8072575
Entry
8072575           CDS       T01086                                 
Name
(RefSeq) uncharacterized protein LOC8072575
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8072575
  09124 Replication and repair
   03420 Nucleotide excision repair
    8072575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8072575
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8072575
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     8072575
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     8072575
SSDB
Motif
Pfam: MAT1 CDC73_C CheR_N
Other DBs
NCBI-GeneID: 8072575
NCBI-ProteinID: XP_002436564
UniProt: A0A921Q034 C5Z505
Position
10:4346479..4349060
AA seq 194 aa
MVMVSGGGGNAWAKEMTVRRRIASIFNKTQEHFPSLKDYNDYLEEVEDMTFNLIEGIDVE
VIEAKIARYQQENVEQIYLSRAKRAEDLAAALKASRMNPIKAEVNDTAAGSSQGISGGAG
VQGQYAPAAVLGGVAQPRPTGMAPQLMGSRSDPLQGDDEETRRLRAERVARAGGWTAELS
KRRALEEAFSAIFI
NT seq 585 nt   +upstreamnt  +downstreamnt
atggtgatggtgtcaggcggtggggggaacgcgtgggcgaaggagatgaccgtccgccgc
aggatagccagcatattcaataagacgcaggaacacttccctagtctgaaggactacaac
gattatctggaagaagttgaggatatgactttcaacctgatcgaagggatagatgtcgag
gtgattgaagcaaaaattgcaagataccaacaggaaaatgtggagcagatatacttgtcc
agagctaaaagggcggaagatcttgcagcagcacttaaagcaagcaggatgaaccctata
aaggccgaggtcaatgatacggctgctgggagttctcagggtattagtggtggggcagga
gttcagggccagtatgcacctgccgctgttcttgggggagtggctcagcctcgccccaca
ggtatggctccccaactaatgggcagtcggtcagatcctcttcaaggagatgacgaggag
accaggagactacgtgcagagcgagtagcacgagctggtggatggactgctgaattgagt
aagagaagagcactggaggaggcgtttagcgccatattcatctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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