KEGG   Sorghum bicolor (sorghum): 8079030
Entry
8079030           CDS       T01086                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8079030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8079030
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8079030
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    8079030
SSDB
Motif
Pfam: Sina_ZnF Sina_RING zf-C3HC4_3 DUF4729 zf-ANAPC11
Other DBs
NCBI-GeneID: 8079030
NCBI-ProteinID: XP_021311770
Position
3:7944673..7945916
AA seq 266 aa
LVGQCKNGHVVCDPCRVRIHGTCPSCRNPVGEIRCRALEKAIADMVLPCAFSRHGCTQLL
KHKERQDHEALCHYAPFVCPFQGCAYSVESTLLLHDHILDTHAINNVVSLVGSTQVVLHW
STPFEVLLDPVDRCVFLLLNGGDVPSGRSLSVVCLGPRPMANQLLEYKLKVGGAGEPGAL
SLSASGSVPCMRRWAGQHPNDGFLFVPNAYWTSFSCVLVNVRVQKSAVDSLVRCFKHASL
ETFNLLVLVFVCLAMALVLAWKTIYR
NT seq 801 nt   +upstreamnt  +downstreamnt
ttggttggccagtgcaagaacgggcacgttgtgtgcgatccctgccgcgttcgcatccac
gggacttgcccgtcctgccgcaatccggttggcgagatcaggtgccgagcgctggagaag
gccatcgccgacatggtcctcccctgcgcgttcagcagacacgggtgcacgcagctgctc
aagcacaaggagaggcaggaccatgaggcgctttgccattatgcaccattcgtgtgcccg
ttccagggttgcgcctactccgtggagtccacgctgctcctccacgaccacatcctagac
actcacgccatcaacaacgtggtcagcttggtcggatccacgcaggtggtgctgcactgg
agcacgccatttgaggtgctcctggacccggtggaccggtgcgtgttcctgctgctcaat
ggcggggacgttccctcaggccggtcgctgtcggtggtctgcctcggcccgcgccccatg
gccaaccagttgctcgagtacaagctgaaggtcggcggcgccggtgaacccggcgcgctc
tcgctgtctgcatcaggctctgtgccctgcatgcgcaggtgggcagggcaacaccctaac
gatgggttcctgttcgtgcctaatgcgtactggacctccttcagctgcgtcctcgtcaac
gtccgtgtccagaagtcggcggtcgacagtttagtacgttgctttaagcacgcctcactg
gaaacattcaatttactggtgttagtttttgtttgcttggcaatggctctcgtgttggca
tggaagacgatctataggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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